RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 DIA2Q08496 732 aaPredicted RBP8.9□□□□□ -0.98
LSR1LSR1 ERR1P0CX10 437 aa8.89□□□□□ -0.99
LSR1LSR1 ERR2P0CX11 437 aa8.89□□□□□ -0.99
LSR1LSR1 MAS2P11914 482 aa8.89□□□□□ -0.99
LSR1LSR1 SNT1P25357 1226 aa8.89□□□□□ -0.99
LSR1LSR1 GID7P25569 745 aa8.89□□□□□ -0.99
LSR1LSR1 RPT1P33299 467 aaKnown RBP8.89□□□□□ -0.99
LSR1LSR1 AST1P35183 429 aa8.89□□□□□ -0.99
LSR1LSR1 CUE2P36075 443 aaKnown RBP8.89□□□□□ -0.99
LSR1LSR1 TRM5P38793 499 aa8.89□□□□□ -0.99
LSR1LSR1 YJL206CP39529 758 aa8.89□□□□□ -0.99
LSR1LSR1 GEM1P39722 662 aa8.89□□□□□ -0.99
LSR1LSR1 YER186CP40101 306 aa8.89□□□□□ -0.99
LSR1LSR1 ERR3P42222 437 aa8.89□□□□□ -0.99
LSR1LSR1 RRT5P43607 289 aa8.89□□□□□ -0.99
LSR1LSR1 RFX1P48743 811 aa8.89□□□□□ -0.99
LSR1LSR1 MCM6P53091 1017 aaKnown RBP8.89□□□□□ -0.99
LSR1LSR1 HST2P53686 357 aa8.89□□□□□ -0.99
LSR1LSR1 YMR209CQ03648 457 aa8.89□□□□□ -0.99
LSR1LSR1 HMO1Q03973 246 aaKnown RBP8.89□□□□□ -0.99
LSR1LSR1 PUS5Q06244 254 aa8.89□□□□□ -0.99
LSR1LSR1 FMP25Q08023 583 aa8.89□□□□□ -0.99
LSR1LSR1 THI21Q08975 551 aa8.89□□□□□ -0.99
LSR1LSR1 STB3Q12427 513 aa8.89□□□□□ -0.99
LSR1LSR1 POX1P13711 748 aa8.88□□□□□ -0.99
LSR1LSR1 YAK1P14680 807 aa8.88□□□□□ -0.99
LSR1LSR1 PMI40P29952 429 aaKnown RBP8.88□□□□□ -0.99
LSR1LSR1 URA10P30402 227 aa8.88□□□□□ -0.99
LSR1LSR1 DGR2P32330 852 aa8.88□□□□□ -0.99
LSR1LSR1 HES1P35843 434 aa8.88□□□□□ -0.99
LSR1LSR1 PHO89P38361 574 aa8.88□□□□□ -0.99
LSR1LSR1 AIM18P38884 321 aa8.88□□□□□ -0.99
LSR1LSR1 STL1P39932 569 aa8.88□□□□□ -0.99
LSR1LSR1 MAF1P41910 395 aa8.88□□□□□ -0.99
LSR1LSR1 VTC4P47075 721 aa8.88□□□□□ -0.99
LSR1LSR1 RPM2Q02773 1202 aa8.88□□□□□ -0.99
LSR1LSR1 RKM2Q03942 479 aa8.88□□□□□ -0.99
LSR1LSR1 TPO1Q07824 586 aa8.88□□□□□ -0.99
LSR1LSR1 YPR202WQ08993 238 aa8.88□□□□□ -0.99
LSR1LSR1 TMA46Q12000 345 aaKnown RBP8.88□□□□□ -0.99
LSR1LSR1 TAF3Q12297 353 aa8.88□□□□□ -0.99
LSR1LSR1 KCS1Q12494 1050 aa8.88□□□□□ -0.99
LSR1LSR1 CTF3Q12748 733 aa8.88□□□□□ -0.99
LSR1LSR1 AI5_ALPHAQ9ZZX1 630 aa8.88□□□□□ -0.99
LSR1LSR1 MPH2P0CD99 609 aa8.87□□□□□ -0.99
LSR1LSR1 GFD2P25370 566 aaKnown RBP8.87□□□□□ -0.99
LSR1LSR1 PYC2P32327 1180 aaKnown RBP8.87□□□□□ -0.99
LSR1LSR1 VPH2P32341 215 aa8.87□□□□□ -0.99
LSR1LSR1 UTR2P32623 467 aa8.87□□□□□ -0.99
LSR1LSR1 AIM26P32858 118 aa8.87□□□□□ -0.99
LSR1LSR1 TGL4P36165 910 aa8.87□□□□□ -0.99
LSR1LSR1 HSL7P38274 827 aa8.87□□□□□ -0.99
LSR1LSR1 FMP33P46998 180 aa8.87□□□□□ -0.99
LSR1LSR1 IML2P47031 731 aa8.87□□□□□ -0.99
LSR1LSR1 NMA2P53204 395 aa8.87□□□□□ -0.99
LSR1LSR1 YNL011CP53980 444 aa8.87□□□□□ -0.99
LSR1LSR1 YPL062WQ02781 134 aa8.87□□□□□ -0.99
LSR1LSR1 YDR476CQ03362 224 aa8.87□□□□□ -0.99
LSR1LSR1 DOT1Q04089 582 aaKnown RBP8.87□□□□□ -0.99
LSR1LSR1 YKU80Q04437 629 aa8.87□□□□□ -0.99
LSR1LSR1 RUP1Q12242 671 aa8.87□□□□□ -0.99
LSR1LSR1 ENO2P00925 437 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 ADE4P04046 510 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 PRP6P19735 899 aaPredicted RBP8.86□□□□□ -0.99
LSR1LSR1 ADE2P21264 571 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 MEF1P25039 761 aa8.86□□□□□ -0.99
LSR1LSR1 RGT1P32862 1170 aa8.86□□□□□ -0.99
LSR1LSR1 BEM3P32873 1128 aa8.86□□□□□ -0.99
LSR1LSR1 TIM23P32897 222 aa8.86□□□□□ -0.99
LSR1LSR1 KES1P35844 434 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 RRN3P36070 627 aa8.86□□□□□ -0.99
LSR1LSR1 RRP14P36080 434 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 RDH54P38086 958 aa8.86□□□□□ -0.99
LSR1LSR1 PCS60P38137 543 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
LSR1LSR1 BEM4P39011 633 aa8.86□□□□□ -0.99
LSR1LSR1 FRT2P39734 528 aa8.86□□□□□ -0.99
LSR1LSR1 YIL089WP40500 205 aa8.86□□□□□ -0.99
LSR1LSR1 MAM33P40513 266 aa8.86□□□□□ -0.99
LSR1LSR1 ARC1P46672 376 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 SET2P46995 733 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 YNL058CP53947 316 aa8.86□□□□□ -0.99
LSR1LSR1 ALG11P53954 548 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 CWC21Q03375 135 aaKnown RBP8.86□□□□□ -0.99
LSR1LSR1 ATG17Q06410 417 aa8.86□□□□□ -0.99
LSR1LSR1 APC9Q12107 265 aa8.86□□□□□ -0.99
LSR1LSR1 YMR030W-AQ3E760 96 aa8.86□□□□□ -0.99
LSR1LSR1 RGS2Q99188 309 aa8.86□□□□□ -0.99
LSR1LSR1 GCY1P14065 312 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
LSR1LSR1 TYR1P20049 452 aa8.85□□□□□ -0.99
LSR1LSR1 PPE1P38796 400 aa8.85□□□□□ -0.99
LSR1LSR1 TDA11P38854 504 aa8.85□□□□□ -0.99
LSR1LSR1 ISM1P48526 1002 aa8.85□□□□□ -0.99
LSR1LSR1 BUD32P53323 261 aa8.85□□□□□ -0.99
LSR1LSR1 MUB1Q03162 620 aa8.85□□□□□ -0.99
LSR1LSR1 SLD7Q08457 257 aa8.85□□□□□ -0.99
LSR1LSR1 NRT1Q08485 598 aa8.85□□□□□ -0.99
LSR1LSR1 CBC2Q08920 208 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
LSR1LSR1 YIG1Q08956 461 aa8.85□□□□□ -0.99
LSR1LSR1 TYW1Q08960 810 aaKnown RBP8.85□□□□□ -0.99
LSR1LSR1 NKP1Q12493 238 aa8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms