RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 MIGA1Q8NAN2 632 aa10□□□□□ -0.81
NECAP1-218ENST00000639595 PIBF1Q8WXW3 757 aa10□□□□□ -0.81
NECAP1-218ENST00000639595 CELF1Q92879 486 aaKnown RBP10□□□□□ -0.81
NECAP1-218ENST00000639595 DNAJC25Q9H1X3 360 aa10□□□□□ -0.81
NECAP1-218ENST00000639595 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 CCDC69A6NI79 296 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 FMNL1O95466 1100 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 FGRP09769 529 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 CMA1P23946 247 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 KCNQ4P56696 695 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 PPARAQ07869 468 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 STX1AQ16623 288 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 PHKBQ93100 1093 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 C8orf37Q96NL8 207 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 AIFM3Q96NN9 605 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 NLRP3Q96P20 1036 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 SETDB2Q96T68 719 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 RXRAP19793 462 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 NDUFA8P51970 172 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 PPP2R5BQ15173 497 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 SF3A1Q15459 793 aaKnown RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 SARM1Q6SZW1 724 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 WASF1Q92558 559 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
NECAP1-218ENST00000639595 TTC12Q9H892 705 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 COL1A1P02452 1464 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-218ENST00000639595 C4AP0C0L4 1744 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 C4BP0C0L5 1744 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 MYH15Q9Y2K3 1946 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 GOLGA6L6A8MZA4 724 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 PPP6R2O75170 966 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 PCP11498 1178 aaKnown RBP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 TM4SF1P30408 202 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 SSRP1Q08945 709 aaKnown RBP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 TPTE2Q6XPS3 522 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ZNF384Q8TF68 577 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ZNF830Q96NB3 372 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ANKRD2Q9GZV1 360 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 SPTLC3Q9NUV7 552 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ANO10Q9NW15 660 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 RAI14Q9P0K7 980 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ABCF2Q9UG63 623 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 IQSEC3Q9UPP2 1182 aaPredicted RBP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 A0A1B0GVL5 298 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ZPR1O75312 459 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 TPM2P07951 284 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 ZNF75DP51815 510 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 WTAPQ15007 396 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 PTPAQ15257 358 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 SEC23AQ15436 765 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 NBPF11Q86T75 865 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 MAP3K14Q99558 947 aa9.98□□□□□ -0.81
NECAP1-218ENST00000639595 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.98□□□□□ -0.81
NECAP1-218ENST00000639595 IGSF3O75054 1194 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 NBPF5PQ86XG9 351 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 CRACR2BQ8N4Y2 399 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 ESR2Q92731 530 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 TIGD1Q96MW7 591 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 SDF4Q9BRK5 362 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 SRP68Q9UHB9 627 aaKnown RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 ERICH2A1L162 156 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 WDHD1O75717 1129 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 CDC25BP30305 580 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 TRIM29Q14134 588 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 NOLC1Q14978 699 aaKnown RBP eCLIP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 RTN1Q16799 776 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 CCDC144CPQ8IYA2 1237 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 MPNDQ8N594 471 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 JMYQ8N9B5 988 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 KIAA1524Q8TCG1 905 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 SDR42E1Q8WUS8 393 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 NSUN4Q96CB9 384 aaKnown RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 KCNF1Q9H3M0 494 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 HPSEQ9Y251 543 aa9.97□□□□□ -0.81
NECAP1-218ENST00000639595 RTCBQ9Y3I0 505 aaKnown RBP9.97□□□□□ -0.81
NECAP1-218ENST00000639595 GNPATO15228 680 aa9.96□□□□□ -0.81
NECAP1-218ENST00000639595 ZNF202O95125 648 aa9.96□□□□□ -0.81
NECAP1-218ENST00000639595 RBM6P78332 1123 aaKnown RBP9.96□□□□□ -0.81
NECAP1-218ENST00000639595 RRP12Q5JTH9 1297 aaKnown RBP9.96□□□□□ -0.81
NECAP1-218ENST00000639595 SMIM5Q71RC9 77 aa9.96□□□□□ -0.81
NECAP1-218ENST00000639595 ARHGEF1Q92888 912 aaKnown RBP9.96□□□□□ -0.81
NECAP1-218ENST00000639595 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.81
NECAP1-218ENST00000639595 CCNL1Q9UK58 526 aaPredicted RBP9.96□□□□□ -0.81
NECAP1-218ENST00000639595 SCN7AQ01118 1682 aa9.96□□□□□ -0.81
NECAP1-218ENST00000639595 IRS2Q9Y4H2 1338 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 MMP1P03956 469 aa9.96□□□□□ -0.82
NECAP1-218ENST00000639595 HIBADHP31937 336 aaKnown RBP9.96□□□□□ -0.82
NECAP1-218ENST00000639595 DHX40Q8IX18 779 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms