RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-222	ENST00000636957	FAM83A	Q86UY5	434 aa		10.9	□□□□□ -0.66
CHRNA7-222	ENST00000636957	MIGA1	Q8NAN2	632 aa		10.9	□□□□□ -0.66
CHRNA7-222	ENST00000636957	RIOK1	Q9BRS2	568 aa	Known RBP	10.9	□□□□□ -0.66
CHRNA7-222	ENST00000636957	IDI2	Q9BXS1	227 aa		10.9	□□□□□ -0.66
CHRNA7-222	ENST00000636957	PPP2R3B	Q9Y5P8	575 aa		10.9	□□□□□ -0.66
CHRNA7-222	ENST00000636957	CNTNAP1	P78357	1384 aa		10.9	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PASK	Q96RG2	1323 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	LAMA4	Q16363	1823 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	MAGEB6P1	A0A0J9YX57	407 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TCP10L2	B9ZVM9	353 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	WDHD1	O75717	1129 aa	Predicted RBP	10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	RGS3	P49796	1198 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CACNB3	P54284	484 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	NFIA	Q12857	509 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SKAP1	Q86WV1	359 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TEX11	Q8IYF3	940 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	APPBP2	Q92624	585 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	RILPL2	Q969X0	211 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DEFB129	Q9H1M3	183 aa		10.89	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TRAF5	O00463	557 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ENTPD3	O75355	529 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	MBD4	O95243	580 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CHGB	P05060	677 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SDS	P20132	328 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DYNLL1	P63167	89 aa	Known RBP	10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	RASA3	Q14644	834 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SLFNL1	Q499Z3	407 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ZMYM1	Q5SVZ6	1142 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FAM151A	Q8WW52	585 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	AIDA	Q96BJ3	306 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CDCA5	Q96FF9	252 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PHF12	Q96QT6	1004 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FAM198A	Q9UFP1	575 aa		10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SCAF8	Q9UPN6	1271 aa	Known RBP	10.88	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DOCK1	Q14185	1865 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SSC5D	A1L4H1	1573 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	HIP1	O00291	1037 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	BMP2KL	Q5H9B9	411 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	LCORL	Q8N3X6	602 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	OSBP2	Q969R2	916 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TEPSIN	Q96N21	525 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TMEM39B	Q9GZU3	492 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PUS7L	Q9H0K6	701 aa	Known RBP	10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CEP350	Q5VT06	3117 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ATRNL1	Q5VV63	1379 aa		10.87	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FLT1	P17948	1338 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	GPAA1	O43292	621 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	NF2	P35240	595 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	C1QTNF8	P60827	252 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TCP10	Q12799	353 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PICALM	Q13492	652 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SUPT20HL1	Q3ZLR7	823 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DLK2	Q6UY11	383 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	TGFBRAP1	Q8WUH2	860 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	HOOK2	Q96ED9	719 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	OTUD5	Q96G74	571 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ARMT1	Q9H993	441 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DDX4	Q9NQI0	724 aa	Known RBP	10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	HELLS	Q9NRZ9	838 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DIAPH3	Q9NSV4	1193 aa		10.86	□□□□□ -0.67
CHRNA7-222	ENST00000636957		A0A0D9SFI3	127 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957		M0R2C6	588 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CELF2	O95319	508 aa	Known RBP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	USP5	P45974	858 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	APLP1	P51693	650 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FMR1	Q06787	632 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	NMI	Q13287	307 aa	Predicted RBP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PRAMEF18	Q5VWM3	479 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	MAPKAPK5	Q8IW41	473 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	STRBP	Q96SI9	672 aa	Known RBP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SEC62	Q99442	399 aa	Known RBP	10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ZNF408	Q9H9D4	720 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ATP8A2	Q9NTI2	1148 aa		10.85	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PHIP	Q8WWQ0	1821 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PTPRF	P10586	1907 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SPDYE4	A6NLX3	237 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	GNAT2	P19087	354 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FKBP1B	P68106	108 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	MCMDC2	Q4G0Z9	681 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CST9	Q5W186	159 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CDAN1	Q8IWY9	1227 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	ZFPM1	Q8IX07	1006 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SDR42E1	Q8WUS8	393 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	FAM227B	Q96M60	508 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	CSRNP1	Q96S65	589 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DHX36	Q9H2U1	1008 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	MKRN1	Q9UHC7	482 aa	Known RBP	10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	GTF3C3	Q9Y5Q9	886 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	SLC4A4	Q9Y6R1	1079 aa		10.84	□□□□□ -0.67
CHRNA7-222	ENST00000636957	PCNT	O95613	3336 aa		10.83	□□□□□ -0.68
CHRNA7-222	ENST00000636957	DDTL	A6NHG4	134 aa	Predicted RBP	10.83	□□□□□ -0.68
CHRNA7-222	ENST00000636957	POTEM	A6NI47	508 aa		10.83	□□□□□ -0.68
CHRNA7-222	ENST00000636957	TMEM88B	A6NKF7	163 aa		10.83	□□□□□ -0.68
CHRNA7-222	ENST00000636957	PPP1R12B	O60237	982 aa	Predicted RBP	10.83	□□□□□ -0.68

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