RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-222	ENST00000636868		A0A096LPE4	126 aa		5.83	□□□□□ -1.48
ATRX-222	ENST00000636868		A0A1W2PPZ6	126 aa		5.83	□□□□□ -1.48
ATRX-222	ENST00000636868	GDNF	P39905	211 aa		5.83	□□□□□ -1.48
ATRX-222	ENST00000636868	DNM1	Q05193	864 aa	Known RBP	5.83	□□□□□ -1.48
ATRX-222	ENST00000636868	SLC26A8	Q96RN1	970 aa		5.83	□□□□□ -1.48
ATRX-222	ENST00000636868	RNGTT	O60942	597 aa	Known RBP	5.82	□□□□□ -1.48
ATRX-222	ENST00000636868	PHACTR2	O75167	634 aa		5.82	□□□□□ -1.48
ATRX-222	ENST00000636868	WDR89	Q96FK6	387 aa	Predicted RBP	5.82	□□□□□ -1.48
ATRX-222	ENST00000636868	NOVA2	Q9UNW9	492 aa	Known RBP	5.82	□□□□□ -1.48
ATRX-222	ENST00000636868	ACIN1	Q9UKV3	1341 aa	Known RBP	5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	TRIM13	O60858	407 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	PDGFA	P04085	211 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	HCLS1	P14317	486 aa	Predicted RBP	5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	LIG1	P18858	919 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	ID3	Q02535	119 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	TTLL4	Q14679	1199 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	NKPD1	Q17RQ9	610 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	SPRED3	Q2MJR0	410 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	MARCH10	Q8NA82	808 aa	Predicted RBP	5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	DISC1	Q9NRI5	854 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	ADAMTS20	P59510	1910 aa		5.81	□□□□□ -1.48
ATRX-222	ENST00000636868	SUV39H1	O43463	412 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	CELA3B	P08861	270 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	PCSK2	P16519	638 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	GRIA4	P48058	902 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	FAM214B	Q7L5A3	538 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	TTC16	Q8NEE8	873 aa		5.8	□□□□□ -1.48
ATRX-222	ENST00000636868	TNFRSF21	O75509	655 aa		5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	B3GALT4	O96024	378 aa		5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	CLCN7	P51798	805 aa		5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	SNX29	Q8TEQ0	813 aa		5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	PCOLCE2	Q9UKZ9	415 aa		5.79	□□□□□ -1.48
ATRX-222	ENST00000636868	SRF	P11831	508 aa		5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	CDCA8	Q53HL2	280 aa		5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	DDX54	Q8TDD1	881 aa	Known RBP	5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	CCDC86	Q9H6F5	360 aa	Known RBP	5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	GTF2IRD1	Q9UHL9	959 aa		5.78	□□□□□ -1.48
ATRX-222	ENST00000636868	NEFM	P07197	916 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	FAM69C	Q0P6D2	419 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	TCERG1L	Q5VWI1	586 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	CCNJL	Q8IV13	435 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	ABHD4	Q8TB40	342 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	XYLT2	Q9H1B5	865 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	ATP13A1	Q9HD20	1204 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	AMOTL2	Q9Y2J4	779 aa		5.77	□□□□□ -1.49
ATRX-222	ENST00000636868	IGF2BP3	O00425	579 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
ATRX-222	ENST00000636868	RFX1	P22670	979 aa		5.76	□□□□□ -1.49
ATRX-222	ENST00000636868	ISL2	Q96A47	359 aa		5.76	□□□□□ -1.49
ATRX-222	ENST00000636868	ZC3H12C	Q9C0D7	883 aa	Known RBP	5.76	□□□□□ -1.49
ATRX-222	ENST00000636868	PCDHGC5	Q9Y5F6	944 aa		5.76	□□□□□ -1.49
ATRX-222	ENST00000636868	ZNF862	O60290	1169 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	IGHA2	P01877	340 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	SLFN14	P0C7P3	912 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	AP3B2	Q13367	1082 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	CALR3	Q96L12	384 aa	Known RBP	5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	TCF12	Q99081	682 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	LIN7B	Q9HAP6	207 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	ZMIZ1	Q9ULJ6	1067 aa		5.75	□□□□□ -1.49
ATRX-222	ENST00000636868	OTOL1	A6NHN0	477 aa	Predicted RBP	5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	GNAT3	A8MTJ3	354 aa		5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	POLR3D	P05423	398 aa	Predicted RBP	5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	MZF1	P28698	734 aa	Predicted RBP	5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	ZNF576	Q9H609	170 aa		5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	SSU72	Q9NP77	194 aa	Known RBP	5.74	□□□□□ -1.49
ATRX-222	ENST00000636868	OVOL3	O00110	214 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	RAC2	P15153	192 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	DLG4	P78352	724 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	KIF4B	Q2VIQ3	1234 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	NPAS4	Q8IUM7	802 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	ALPK1	Q96QP1	1244 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	MCOLN1	Q9GZU1	580 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	SEMA3G	Q9NS98	782 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	SEPT3	Q9UH03	358 aa		5.73	□□□□□ -1.49
ATRX-222	ENST00000636868	CNOT6	Q9ULM6	557 aa	Known RBP	5.73	□□□□□ -1.49
ATRX-222	ENST00000636868		A0A1W2PP55	124 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	INSRR	P14616	1297 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	ERVFC1	P60507	584 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	CFAP70	Q5T0N1	1121 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	ERICH6B	Q5W0A0	696 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	STK32A	Q8WU08	396 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	CCDC120	Q96HB5	630 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	HSPA12B	Q96MM6	686 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	POLI	Q9UNA4	740 aa		5.72	□□□□□ -1.49
ATRX-222	ENST00000636868	SASH1	O94885	1247 aa		5.71	□□□□□ -1.5
ATRX-222	ENST00000636868	TTC6	Q86TZ1	520 aa		5.71	□□□□□ -1.5
ATRX-222	ENST00000636868	PRDM10	Q9NQV6	1147 aa		5.71	□□□□□ -1.5
ATRX-222	ENST00000636868	SLAMF8	Q9P0V8	285 aa		5.71	□□□□□ -1.5
ATRX-222	ENST00000636868	KCTD3	Q9Y597	815 aa		5.71	□□□□□ -1.5
ATRX-222	ENST00000636868	AKAP8	O43823	692 aa	Known RBP	5.7	□□□□□ -1.5
ATRX-222	ENST00000636868	ZNF385B	Q569K4	471 aa		5.7	□□□□□ -1.5
ATRX-222	ENST00000636868	NOM1	Q5C9Z4	860 aa	Known RBP	5.7	□□□□□ -1.5
ATRX-222	ENST00000636868	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5.7	□□□□□ -1.5
ATRX-222	ENST00000636868	FEZF2	Q8TBJ5	459 aa		5.7	□□□□□ -1.5
ATRX-222	ENST00000636868	MYLIP	Q8WY64	445 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms