RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NT5DC1Q5TFE4 455 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 IQUBQ8NA54 791 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 C4AP0C0L4 1744 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 C4BP0C0L5 1744 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 PDE4BQ07343 736 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 CLIC6Q96NY7 704 aa16.94■□□□□ 0.3
CACNA1A-220ENST00000635988 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 EIF3JO75822 258 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 ADKP55263 362 aaKnown RBP16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 POSTNQ15063 836 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 CT47A1Q5JQC4 288 aaPredicted RBP16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 KANK3Q6NY19 840 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 HDXQ7Z353 690 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 TUBBP07437 444 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 BMP6P22004 513 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 USP5P45974 858 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.93■□□□□ 0.3
CACNA1A-220ENST00000635988 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 KIF5CO60282 957 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 CDC23Q9UJX2 597 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 IVLP07476 585 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 CDC27P30260 824 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 ACTN2P35609 894 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 SARSP49591 514 aaKnown RBP16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 NR1I3Q14994 352 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 AIFM3Q96NN9 605 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 RAB21Q9UL25 225 aa16.92■□□□□ 0.3
CACNA1A-220ENST00000635988 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 GPAA1O43292 621 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 ERCC5P28715 1186 aaPredicted RBP16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 LMAN1P49257 510 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 MORC3Q14149 939 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 MSANTD4Q8NCY6 345 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 WASF1Q92558 559 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 STK36Q9NRP7 1315 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 PUS7LQ9H0K6 701 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 GBP3Q9H0R5 595 aa16.91■□□□□ 0.3
CACNA1A-220ENST00000635988 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 VGLL3A8MV65 326 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 ZBTB43O43298 467 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 PTPN21Q16825 1174 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 SAFBQ15424 915 aaKnown RBP eCLIP16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 BEND6Q5SZJ8 279 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 DESI2Q9BSY9 194 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 ADGRG1Q9Y653 693 aa16.9■□□□□ 0.3
CACNA1A-220ENST00000635988 H3BQF6 201 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 MYO1CO00159 1063 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 PTPREP23469 700 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 MRPL44Q9H9J2 332 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 PLCD1P51178 756 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 ANKZF1Q9H8Y5 726 aa16.89■□□□□ 0.29
CACNA1A-220ENST00000635988 NTRK3Q16288 839 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 HSP90AA4PQ58FG1 418 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 PHKBQ93100 1093 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 ACBD3Q9H3P7 528 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 EFCC1Q9HA90 598 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 FOXN1O15353 648 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 RPS6KA5O75582 802 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 CABP4P57796 275 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
CACNA1A-220ENST00000635988 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 CTAGE9A4FU28 777 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 ZAP70P43403 619 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
CACNA1A-220ENST00000635988 SRLQ86TD4 932 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms