RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 FAM170BA6NMN3 283 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 GIPC1O14908 333 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 SORBS3O60504 671 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 B3GALT4O96024 378 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 POLR3DP05423 398 aaPredicted RBP4.37□□□□□ -1.71
PSPC1-208ENST00000635562 C8AP07357 584 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 NFICP08651 508 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 CTSHP09668 335 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 RAB6AP20340 208 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 XPCQ01831 940 aaPredicted RBP4.37□□□□□ -1.71
PSPC1-208ENST00000635562 PTPN12Q05209 780 aaKnown RBP4.37□□□□□ -1.71
PSPC1-208ENST00000635562 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 OGFOD3Q6PK18 319 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 ZNF765Q7L2R6 523 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 DYMQ7RTS9 669 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 BACH2Q9BYV9 841 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 C12orf49Q9H741 205 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 LRRC4CQ9HCJ2 640 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 ZC3H7BQ9UGR2 993 aaKnown RBP4.37□□□□□ -1.71
PSPC1-208ENST00000635562 AP4E1Q9UPM8 1137 aa4.37□□□□□ -1.71
PSPC1-208ENST00000635562 ASPAP45381 313 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 PSMD2Q13200 908 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 GRM2Q14416 872 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 PLCL1Q15111 1095 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 AKAP4Q5JQC9 854 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
PSPC1-208ENST00000635562 DHX37Q8IY37 1157 aaKnown RBP4.36□□□□□ -1.71
PSPC1-208ENST00000635562 TCF12Q99081 682 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 LATS2Q9NRM7 1088 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 SPG7Q9UQ90 795 aa4.36□□□□□ -1.71
PSPC1-208ENST00000635562 ITPKAP23677 461 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 PKN1Q16512 942 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 TAF7LQ5H9L4 462 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 RPS26P11Q5JNZ5 115 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-208ENST00000635562 SEZ6L2Q6UXD5 910 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 ATG4DQ86TL0 474 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-208ENST00000635562 C3orf58Q8NDZ4 430 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 ANKRD24Q8TF21 1146 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 BCL7CQ8WUZ0 217 aaPredicted RBP4.35□□□□□ -1.71
PSPC1-208ENST00000635562 BCO2Q9BYV7 579 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 SRCIN1Q9C0H9 1055 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 ATXN3LQ9H3M9 355 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 ZNF576Q9H609 170 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 MKNK2Q9HBH9 465 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 FAM105AQ9NUU6 356 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 NLRP2Q9NX02 1062 aa4.35□□□□□ -1.71
PSPC1-208ENST00000635562 METTL12A8MUP2 240 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 AOC2O75106 756 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 SLFN14P0C7P3 912 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 TCF3P15923 654 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 EIF4BP23588 611 aaKnown RBP4.34□□□□□ -1.71
PSPC1-208ENST00000635562 ITGAEP38570 1179 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 GRIA4P48058 902 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 PDE3AQ14432 1141 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 ZNF423Q2M1K9 1284 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 TSNAXIP1Q2TAA8 658 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 NXPE4Q6UWF7 544 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 SHISA5Q8N114 240 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 NETO1Q8TDF5 533 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 CRELD1Q96HD1 420 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 TRIM56Q9BRZ2 755 aaKnown RBP4.34□□□□□ -1.71
PSPC1-208ENST00000635562 PIDD1Q9HB75 910 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 ABCB6Q9NP58 842 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 C1GALT1Q9NS00 363 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 FAM8A1Q9UBU6 413 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 DAGLAQ9Y4D2 1042 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 USP31Q70CQ4 1352 aa4.34□□□□□ -1.71
PSPC1-208ENST00000635562 SCAMP3O14828 347 aaKnown RBP4.33□□□□□ -1.72
PSPC1-208ENST00000635562 PAPLNO95428 1278 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 USP17L7P0C7H9 530 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 FANCCQ00597 558 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 ZNF792Q3KQV3 632 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
PSPC1-208ENST00000635562 WDR18Q9BV38 432 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 BCL11AQ9H165 835 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 MRS2Q9HD23 443 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 METTL5Q9NRN9 209 aaKnown RBP4.33□□□□□ -1.72
PSPC1-208ENST00000635562 VTI1BQ9UEU0 232 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 VAV3Q9UKW4 847 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 TRAK1Q9UPV9 953 aa4.33□□□□□ -1.72
PSPC1-208ENST00000635562 TMEM238LA0A1B0GVL6 79 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 DBX1A6NMT0 343 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 GADD45BO75293 160 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 FARP2O94887 1054 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 FUT4P22083 530 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 ST13P50502 369 aaKnown RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 ID3Q02535 119 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 PRKCQQ04759 706 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 RAD51AP2Q09MP3 1159 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 IFI16Q16666 785 aaKnown RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 SPRED3Q2MJR0 410 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 TMEM87AQ8NBN3 555 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 BHLHE22Q8NFJ8 381 aaPredicted RBP4.32□□□□□ -1.72
PSPC1-208ENST00000635562 TMEM40Q8WWA1 233 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 EHD4Q9H223 541 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 KRT82Q9NSB4 513 aa4.32□□□□□ -1.72
PSPC1-208ENST00000635562 TMEM265A0A087WTH1 108 aa4.31□□□□□ -1.72
PSPC1-208ENST00000635562 CTSBP07858 339 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms