RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RAB11FIP4Q86YS3 637 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 AOPEPQ8N6M6 819 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 TIGD1Q96MW7 591 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 MPHOSPH8Q99549 860 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 BPIFA3Q9BQP9 254 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 UTP14AQ9BVJ6 771 aaKnown RBP9.35□□□□□ -0.91
GPC3-204ENST00000631057 KRT23Q9C075 422 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NAPBQ9H115 298 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NRBP1Q9UHY1 535 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NEDD4P46934 1319 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 SLIT2O94813 1529 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NRAPQ86VF7 1730 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 NID2Q14112 1375 aa9.35□□□□□ -0.91
GPC3-204ENST00000631057 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 KIF28PB7ZC32 967 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 PPP6R2O75170 966 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 MBD4O95243 580 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 NLRP12P59046 1061 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 LRMPQ12912 555 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 GNL2Q13823 731 aaKnown RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 DHX8Q14562 1220 aaKnown RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 TMEM67Q5HYA8 995 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 AXDND1Q5T1B0 1012 aaPredicted RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 KRT40Q6A162 431 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 MAGEB6Q8N7X4 407 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 IGDCC4Q8TDY8 1250 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
GPC3-204ENST00000631057 WASF1Q92558 559 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 NACAP1Q9BZK3 213 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 LY9Q9HBG7 655 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
GPC3-204ENST00000631057 HAX1O00165 279 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 ZNF202O95125 648 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 IARSP41252 1262 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 GSDMDP57764 484 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 E2F4Q16254 413 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 MICU3Q86XE3 530 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 IFNL3Q8IZI9 196 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 MTA3Q9BTC8 594 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 PNPLA7Q6ZV29 1317 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 COL5A3P25940 1745 aaPredicted RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 CCDC69A6NI79 296 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 SMTNL1A8MU46 457 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 IFIT3O14879 490 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 PFKFB1P16118 471 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 U2AF2P26368 475 aaKnown RBP eCLIP9.33□□□□□ -0.922e-8■■□□□ 13.1
GPC3-204ENST00000631057 CDC27P30260 824 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 IGHMBP2P38935 993 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 CCDC144BQ3MJ40 725 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 SUSD4Q5VX71 490 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 MFSD6Q6ZSS7 791 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 LRRC8AQ8IWT6 810 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 EPB41L4AQ9HCS5 686 aaPredicted RBP9.33□□□□□ -0.92
GPC3-204ENST00000631057 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 SLC12A7Q9Y666 1083 aa9.33□□□□□ -0.92
GPC3-204ENST00000631057 BAZ2AQ9UIF9 1905 aaKnown RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 FAM237AA0A1B0GTK4 181 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 GSG1L2A8MUP6 293 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CUTAO60888 179 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CAMTA2O94983 1202 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 SYKP43405 635 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 TDO2P48775 406 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 RCAN1P53805 252 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.922e-8■■■□□ 15.8
GPC3-204ENST00000631057 NTRK3Q16288 839 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 TPD52L1Q16890 204 aaPredicted RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 STAG1Q8WVM7 1258 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 PHKBQ93100 1093 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 AIFM3Q96NN9 605 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CDC5LQ99459 802 aaKnown RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 OSBPL5Q9H0X9 879 aaPredicted RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 RNF41Q9H4P4 317 aaPredicted RBP9.32□□□□□ -0.92
GPC3-204ENST00000631057 ARMT1Q9H993 441 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 GJB4Q9NTQ9 266 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 MROH7-TTC4A0A0A0MT08 1334 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
GPC3-204ENST00000631057 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 ERICH2A1L162 156 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 IKBKBO14920 756 aa9.31□□□□□ -0.92
GPC3-204ENST00000631057 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms