RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CCDC113Q9H0I3 377 aa6.34□□□□□ -1.39
CDRT1-208ENST00000630868 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
CDRT1-208ENST00000630868 ST7Q9NRC1 585 aa6.34□□□□□ -1.39
CDRT1-208ENST00000630868 MAPK8IP1Q9UQF2 711 aa6.34□□□□□ -1.39
CDRT1-208ENST00000630868 LEMD3Q9Y2U8 911 aa6.34□□□□□ -1.39
CDRT1-208ENST00000630868 DIP2AQ14689 1571 aa6.34□□□□□ -1.39
CDRT1-208ENST00000630868 ADAMTS13Q76LX8 1427 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 RIMS2Q9UQ26 1411 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 MMP20O60882 483 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 SASH3O75995 380 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 F13A1P00488 732 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 RXRBP28702 533 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 GRIA4P48058 902 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 GYS2P54840 703 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 TNNI3KQ59H18 835 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
CDRT1-208ENST00000630868 ZNF697Q5TEC3 545 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 SPRYD7Q5W111 196 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 TTBK2Q6IQ55 1244 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
CDRT1-208ENST00000630868 AGMOQ6ZNB7 445 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 PRICKLE2Q7Z3G6 844 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 SNIP1Q8TAD8 396 aaKnown RBP6.33□□□□□ -1.4
CDRT1-208ENST00000630868 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 BRD7Q9NPI1 651 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 DZANK1Q9NVP4 752 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 TMEM260Q9NX78 707 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 CHPF2Q9P2E5 772 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 ADGRL2O95490 1459 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.33□□□□□ -1.4
CDRT1-208ENST00000630868 DCCP43146 1447 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 SETD5Q9C0A6 1442 aa6.33□□□□□ -1.4
CDRT1-208ENST00000630868 EP400Q96L91 3159 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 TMEM131LA2VDJ0 1609 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 ANKRD30AQ9BXX3 1397 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 PTPN23Q9H3S7 1636 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 A0A1B0GTH6 734 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 METTL12A8MUP2 240 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 PPP1R12AO14974 1030 aaPredicted RBP6.32□□□□□ -1.4
CDRT1-208ENST00000630868 TRPA1O75762 1119 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 TRIM37O94972 964 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 RHOQP17081 205 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 GIPRP48546 466 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 EIF6P56537 245 aaKnown RBP6.32□□□□□ -1.4
CDRT1-208ENST00000630868 IFRD2Q12894 506 aaPredicted RBP6.32□□□□□ -1.4
CDRT1-208ENST00000630868 RASGRF1Q13972 1273 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 SEPT6Q14141 434 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 CCDC181Q5TID7 509 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
CDRT1-208ENST00000630868 ACTR10Q9NZ32 417 aa6.32□□□□□ -1.4
CDRT1-208ENST00000630868 PHF20L1A8MW92 1017 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 PDPK1O15530 556 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 TARSP26639 723 aaKnown RBP6.31□□□□□ -1.4
CDRT1-208ENST00000630868 FAAP100Q0VG06 881 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 SPRED3Q2MJR0 410 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 ARSHQ5FYA8 562 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 MEX3CQ5U5Q3 659 aaKnown RBP6.31□□□□□ -1.4
CDRT1-208ENST00000630868 RASIP1Q5U651 963 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 BRINP3Q76B58 766 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 NECAB3Q96P71 396 aaPredicted RBP6.31□□□□□ -1.4
CDRT1-208ENST00000630868 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 CEP44Q9C0F1 390 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 RUBCNLQ9H714 662 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 TIMMDC1Q9NPL8 285 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 ZFATQ9P243 1243 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 G3BP2Q9UN86 482 aaKnown RBP6.31□□□□□ -1.4
CDRT1-208ENST00000630868 PCDHB5Q9Y5E4 795 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 MYO5BQ9ULV0 1848 aa6.31□□□□□ -1.4
CDRT1-208ENST00000630868 AFF2P51816 1311 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 KIF4AO95239 1232 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 S100BP04271 92 aaPredicted RBP6.3□□□□□ -1.4
CDRT1-208ENST00000630868 ATF3P18847 181 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 ITPKAP23677 461 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 C2orf27AQ580R0 203 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 IFFO2Q5TF58 517 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 C16orf86Q6ZW13 317 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDRT1-208ENST00000630868 FERD3LQ96RJ6 166 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 OSMRQ99650 979 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 FEZ1Q99689 392 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 CRISPLD1Q9H336 500 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 C11orf16Q9NQ32 467 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 SEC31BQ9NQW1 1179 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 GJA3Q9Y6H8 435 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 RGS12O14924 1447 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 PTPRUQ92729 1446 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 ASXL1Q8IXJ9 1541 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 GCC2Q8IWJ2 1684 aa6.3□□□□□ -1.4
CDRT1-208ENST00000630868 NHSL1Q5SYE7 1610 aa6.29□□□□□ -1.4
CDRT1-208ENST00000630868 FAM221AA4D161 298 aa6.29□□□□□ -1.4
CDRT1-208ENST00000630868 B2RBV5 119 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms