RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 FAAP100Q0VG06 881 aa6.23□□□□□ -1.41
VPS8-228ENST00000628962 KCNMB1Q16558 191 aa6.23□□□□□ -1.41
VPS8-228ENST00000628962 LCNL1Q6ZST4 164 aa6.23□□□□□ -1.41
VPS8-228ENST00000628962 ERICH6Q7L0X2 663 aa6.23□□□□□ -1.41
VPS8-228ENST00000628962 ZC3H12CQ9C0D7 883 aaKnown RBP6.23□□□□□ -1.41
VPS8-228ENST00000628962 NPHS2Q9NP85 383 aa6.23□□□□□ -1.41
VPS8-228ENST00000628962 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
VPS8-228ENST00000628962 NEFMP07197 916 aa6.22□□□□□ -1.41
VPS8-228ENST00000628962 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
VPS8-228ENST00000628962 PHLDB3Q6NSJ2 640 aa6.22□□□□□ -1.41
VPS8-228ENST00000628962 PRPF40BQ6NWY9 871 aaKnown RBP6.22□□□□□ -1.41
VPS8-228ENST00000628962 FAM214BQ7L5A3 538 aa6.22□□□□□ -1.41
VPS8-228ENST00000628962 HEXIM2Q96MH2 286 aaKnown RBP6.22□□□□□ -1.41
VPS8-228ENST00000628962 MTMR7Q9Y216 660 aa6.22□□□□□ -1.41
VPS8-228ENST00000628962 ITIH2P19823 946 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 ZNF157P51786 506 aaPredicted RBP6.21□□□□□ -1.42
VPS8-228ENST00000628962 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 CCDC97Q96F63 343 aaPredicted RBP6.21□□□□□ -1.42
VPS8-228ENST00000628962 LIN37Q96GY3 246 aaPredicted RBP6.21□□□□□ -1.42
VPS8-228ENST00000628962 PPP1R16BQ96T49 567 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 ANO2Q9NQ90 1003 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 CTNND2Q9UQB3 1225 aa6.21□□□□□ -1.42
VPS8-228ENST00000628962 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 NEFLP07196 543 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 ZNF211Q13398 564 aaPredicted RBP6.2□□□□□ -1.42
VPS8-228ENST00000628962 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 LILRA6Q6PI73 481 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 SIAH1Q8IUQ4 282 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
VPS8-228ENST00000628962 ZSCAN18Q8TBC5 510 aaPredicted RBP6.2□□□□□ -1.42
VPS8-228ENST00000628962 ISL2Q96A47 359 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 SERPINA10Q9UK55 444 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 NCANO14594 1321 aa6.2□□□□□ -1.42
VPS8-228ENST00000628962 IGF2BP3O00425 579 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS8-228ENST00000628962 CPNE3O75131 537 aaKnown RBP6.19□□□□□ -1.42
VPS8-228ENST00000628962 ABL1P00519 1130 aa6.19□□□□□ -1.42
VPS8-228ENST00000628962 HNRNPUQ00839 825 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS8-228ENST00000628962 ZP2Q05996 745 aa6.19□□□□□ -1.42
VPS8-228ENST00000628962 ORC1Q13415 861 aa6.19□□□□□ -1.42
VPS8-228ENST00000628962 SPACA3Q8IXA5 215 aa6.19□□□□□ -1.42
VPS8-228ENST00000628962 PRRG2O14669 202 aa6.18□□□□□ -1.42
VPS8-228ENST00000628962 KRT1P04264 644 aa6.18□□□□□ -1.42
VPS8-228ENST00000628962 AFMP43652 599 aa6.18□□□□□ -1.42
VPS8-228ENST00000628962 IKZF1Q13422 519 aa6.18□□□□□ -1.42
VPS8-228ENST00000628962 RNF214Q8ND24 703 aa6.18□□□□□ -1.42
VPS8-228ENST00000628962 GLI1P08151 1106 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 ZSCAN22P10073 491 aaPredicted RBP6.17□□□□□ -1.42
VPS8-228ENST00000628962 ERVK-24P63145 666 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 ECM1Q16610 540 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 NKPD1Q17RQ9 610 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
VPS8-228ENST00000628962 PRR23BQ6ZRT6 265 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 SYDE1Q6ZW31 735 aaPredicted RBP6.17□□□□□ -1.42
VPS8-228ENST00000628962 ANKLE2Q86XL3 938 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS8-228ENST00000628962 GTF2IRD1Q9UHL9 959 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 BRPF3Q9ULD4 1205 aa6.17□□□□□ -1.42
VPS8-228ENST00000628962 TTLL10Q6ZVT0 673 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 KCNB2Q92953 911 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 CCDC74AQ96AQ1 378 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 FAM129BQ96TA1 746 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 SSU72Q9NP77 194 aaKnown RBP6.16□□□□□ -1.42
VPS8-228ENST00000628962 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 RAPGEFL1Q9UHV5 662 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 PITPNM2Q9BZ72 1349 aa6.16□□□□□ -1.42
VPS8-228ENST00000628962 B8ZZF3 427 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 ICMTO60725 284 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 C1QTNF9P0C862 333 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 GRM2Q14416 872 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 STK35Q8TDR2 534 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 DNAJC25Q9H1X3 360 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 PRDM10Q9NQV6 1147 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 EGFL7Q9UHF1 273 aa6.15□□□□□ -1.42
VPS8-228ENST00000628962 NTF4P34130 210 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 CLCN7P51798 805 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 PDE3BQ13370 1112 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 TMEM39AQ9NV64 488 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
VPS8-228ENST00000628962 EIF1AYO14602 144 aaKnown RBP6.13□□□□□ -1.43
VPS8-228ENST00000628962 GADD45BO75293 160 aaPredicted RBP6.13□□□□□ -1.43
VPS8-228ENST00000628962 IGHA2P01877 340 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 PPP2R3AQ06190 1150 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 MPZL3Q6UWV2 235 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 AMIGO3Q86WK7 504 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
VPS8-228ENST00000628962 GPN3Q9UHW5 284 aaPredicted RBP6.13□□□□□ -1.43
VPS8-228ENST00000628962 NDUFB5O43674 189 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 EOMESO95936 686 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 ARHGAP4P98171 946 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 TMEM67Q5HYA8 995 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 DTHD1Q6ZMT9 781 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 C14orf37Q86TY3 774 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 SULF2Q8IWU5 870 aa6.12□□□□□ -1.43
VPS8-228ENST00000628962 FBXO15Q8NCQ5 510 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms