RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 TIGD1Q96MW7 591 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■■□ 21.3
CTNNA1-244ENST00000627109 PIH1D3Q9NQM4 214 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 PYCARDQ9ULZ3 195 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 HPSEQ9Y251 543 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 DDX60LQ5H9U9 1706 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 ANKRD18BA2A2Z9 1011 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 CTIFO43310 598 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 PRC1O43663 620 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 CHAF1AQ13111 956 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 CCAR1Q8IX12 1150 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 IGDCC4Q8TDY8 1250 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 NCOA5Q9HCD5 579 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 PCDHA7Q9UN72 937 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.071e-6■■■□□ 17.1
CTNNA1-244ENST00000627109 LIFRP42702 1097 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 CCT2P78371 535 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 KIF23Q02241 960 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 INTS5Q6P9B9 1019 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 TBC1D10CQ8IV04 446 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 KCNG4Q8TDN1 519 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 LPIN2Q92539 896 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 TMEM87BQ96K49 555 aa8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNNA1-244ENST00000627109 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 PUM3Q15397 648 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 SYCP1Q15431 976 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF827Q17R98 1081 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 C11orf57Q6ZUT1 292 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 STRBPQ96SI9 672 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 TRIM5Q9C035 493 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF804BA4D1E1 1349 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 PPP6R2O75170 966 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF165P49910 485 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 CCDC102BQ68D86 513 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 MAP3K14Q99558 947 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 FTOQ9C0B1 505 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 PTPAQ15257 358 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 CYB5R4Q7L1T6 521 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 CHST3Q7LGC8 479 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 GPHNQ9NQX3 736 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 ANGEL1Q9UNK9 670 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 TACC3Q9Y6A5 838 aa8.33□□□□□ -1.08
CTNNA1-244ENST00000627109 KIF28PB7ZC32 967 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 PDE6AP16499 860 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 KCNJ6P48051 423 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 SYNE4Q8N205 404 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 MRPS27Q92552 414 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 LY9Q9HBG7 655 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 TUBE1Q9UJT0 475 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 GOLGA6L19H0YKK7 550 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF213O14771 459 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 NEMFO60524 1076 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 CMA1P23946 247 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 PI16Q6UXB8 463 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 COL23A1Q86Y22 540 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 RAB11FIP4Q86YS3 637 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 PRDM16Q9HAZ2 1276 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 EPB41L4AQ9HCS5 686 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 COL1A1P02452 1464 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 BECN2A8MW95 431 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 SLC39A14Q15043 492 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 LDHAL6AQ6ZMR3 332 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 OSBPL5Q9H0X9 879 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 TRMT112Q9UI30 125 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 ANAPC4Q9UJX5 808 aa8.32□□□□□ -1.08
CTNNA1-244ENST00000627109 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 KLF18A0A0U1RQI7 1052 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 CAMTA2O94983 1202 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 HMGB2P26583 209 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 POLD1P28340 1107 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 APOA5Q6Q788 366 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 NBPF5PQ86XG9 351 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 STAG1Q8WVM7 1258 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 ANO10Q9NW15 660 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 ZNF532Q9HCE3 1301 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 NTSR2O95665 410 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 APPP05067 770 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 FGRP09769 529 aa8.31□□□□□ -1.08
CTNNA1-244ENST00000627109 HAND2P61296 217 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms