RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PCOLCE2Q9UKZ9 415 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 CTNND2Q9UQB3 1225 aa6.52□□□□□ -1.37
VBP1-204ENST00000625964 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.51□□□□□ -1.37
VBP1-204ENST00000625964 ID3Q02535 119 aa6.51□□□□□ -1.37
VBP1-204ENST00000625964 U3KQE9 123 aa6.51□□□□□ -1.37
VBP1-204ENST00000625964 NPR3P17342 541 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 ZP2Q05996 745 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 AAMPQ13685 434 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 ECM1Q16610 540 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 ZNF576Q9H609 170 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 C1QTNF9P0C862 333 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 ITPKAP23677 461 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 PTPN12Q05209 780 aaKnown RBP6.5□□□□□ -1.37
VBP1-204ENST00000625964 IKZF1Q13422 519 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 MPZL3Q6UWV2 235 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
VBP1-204ENST00000625964 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
VBP1-204ENST00000625964 LEFTY1O75610 366 aa6.49□□□□□ -1.37
VBP1-204ENST00000625964 KIAA0319Q5VV43 1072 aa6.49□□□□□ -1.37
VBP1-204ENST00000625964 PRR23BQ6ZRT6 265 aa6.49□□□□□ -1.37
VBP1-204ENST00000625964 DISC1Q9NRI5 854 aa6.49□□□□□ -1.37
VBP1-204ENST00000625964 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
VBP1-204ENST00000625964 IGF2BP3O00425 579 aaKnown RBP eCLIP6.48□□□□□ -1.37
VBP1-204ENST00000625964 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
VBP1-204ENST00000625964 FAM13AO94988 1023 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 KRT1P04264 644 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 POLR3DP05423 398 aaPredicted RBP6.48□□□□□ -1.37
VBP1-204ENST00000625964 LIG1P18858 919 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 KIF4BQ2VIQ3 1234 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 TMEM67Q5HYA8 995 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 KIRREL1Q96J84 757 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 PRDM7Q9NQW5 492 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 GTF2IRD1Q9UHL9 959 aa6.48□□□□□ -1.37
VBP1-204ENST00000625964 CTSWP56202 376 aa6.47□□□□□ -1.37
VBP1-204ENST00000625964 RPS26P11Q5JNZ5 115 aaPredicted RBP6.47□□□□□ -1.37
VBP1-204ENST00000625964 GJD3Q8N144 294 aa6.47□□□□□ -1.37
VBP1-204ENST00000625964 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
VBP1-204ENST00000625964 ITIH2P19823 946 aa6.46□□□□□ -1.37
VBP1-204ENST00000625964 TTLL4Q14679 1199 aa6.46□□□□□ -1.37
VBP1-204ENST00000625964 FYB2Q5VWT5 728 aa6.46□□□□□ -1.37
VBP1-204ENST00000625964 CYFIP1Q7L576 1253 aa6.46□□□□□ -1.37
VBP1-204ENST00000625964 CCDC86Q9H6F5 360 aaKnown RBP6.46□□□□□ -1.37
VBP1-204ENST00000625964 CARNS1A5YM72 827 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 TMEM88BA6NKF7 163 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 INHBBP09529 407 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 TMEM253P0C7T8 217 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 WDR89Q96FK6 387 aaPredicted RBP6.45□□□□□ -1.38
VBP1-204ENST00000625964 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 NEFLP07196 543 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 CLCN7P51798 805 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 FAM214BQ7L5A3 538 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 TOP6BLQ8N6T0 577 aa6.45□□□□□ -1.38
VBP1-204ENST00000625964 HEXIM2Q96MH2 286 aaKnown RBP6.45□□□□□ -1.38
VBP1-204ENST00000625964 NPIPB6E9PJ23 425 aa6.44□□□□□ -1.38
VBP1-204ENST00000625964 ZNF862O60290 1169 aa6.44□□□□□ -1.38
VBP1-204ENST00000625964 FZD6O60353 706 aa6.44□□□□□ -1.38
VBP1-204ENST00000625964 HCLS1P14317 486 aaPredicted RBP6.44□□□□□ -1.38
VBP1-204ENST00000625964 SPACA3Q8IXA5 215 aa6.44□□□□□ -1.38
VBP1-204ENST00000625964 CCDC120Q96HB5 630 aa6.44□□□□□ -1.38
VBP1-204ENST00000625964 KCNA10Q16322 511 aa6.43□□□□□ -1.38
VBP1-204ENST00000625964 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.43□□□□□ -1.38
VBP1-204ENST00000625964 RETREG2Q8NC44 543 aa6.43□□□□□ -1.38
VBP1-204ENST00000625964 SSU72Q9NP77 194 aaKnown RBP6.43□□□□□ -1.38
VBP1-204ENST00000625964 CD320Q9NPF0 282 aa6.43□□□□□ -1.38
VBP1-204ENST00000625964 USTQ9Y2C2 406 aa6.43□□□□□ -1.38
VBP1-204ENST00000625964 GSTP1P09211 210 aaKnown RBP6.42□□□□□ -1.38
VBP1-204ENST00000625964 MED14OSP0DP75 135 aa6.42□□□□□ -1.38
VBP1-204ENST00000625964 GDNFP39905 211 aa6.42□□□□□ -1.38
VBP1-204ENST00000625964 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
VBP1-204ENST00000625964 EHD4Q9H223 541 aa6.42□□□□□ -1.38
VBP1-204ENST00000625964 JAG2Q9Y219 1238 aa6.42□□□□□ -1.38
VBP1-204ENST00000625964 ISL2Q96A47 359 aa6.41□□□□□ -1.38
VBP1-204ENST00000625964 NSUN3Q9H649 340 aaKnown RBP6.41□□□□□ -1.38
VBP1-204ENST00000625964 PITPNM2Q9BZ72 1349 aa6.41□□□□□ -1.38
VBP1-204ENST00000625964 TCAF2A6NFQ2 919 aa6.4□□□□□ -1.38
VBP1-204ENST00000625964 NKPD1Q17RQ9 610 aa6.4□□□□□ -1.38
VBP1-204ENST00000625964 ATG14Q6ZNE5 492 aa6.4□□□□□ -1.38
VBP1-204ENST00000625964 RNF214Q8ND24 703 aa6.4□□□□□ -1.38
VBP1-204ENST00000625964 ZC3H12CQ9C0D7 883 aaKnown RBP6.4□□□□□ -1.38
VBP1-204ENST00000625964 MTMR7Q9Y216 660 aa6.4□□□□□ -1.38
VBP1-204ENST00000625964 GNAT3A8MTJ3 354 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 NEFMP07197 916 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 GLDCP23378 1020 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 SSFA2P28290 1259 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 ERVK-24P63145 666 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 PRPF40BQ6NWY9 871 aaKnown RBP6.4□□□□□ -1.39
VBP1-204ENST00000625964 RELTQ969Z4 430 aa6.4□□□□□ -1.39
VBP1-204ENST00000625964 HOXA5P20719 270 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 FKBP4Q02790 459 aaKnown RBP eCLIP6.39□□□□□ -1.39
VBP1-204ENST00000625964 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 NPAS4Q8IUM7 802 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 DIRC2Q96SL1 478 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
VBP1-204ENST00000625964 ZC3H12AQ5D1E8 599 aaKnown RBP6.38□□□□□ -1.39
VBP1-204ENST00000625964 B4GALNT3Q6L9W6 998 aa6.38□□□□□ -1.39
VBP1-204ENST00000625964 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
VBP1-204ENST00000625964 CARS2Q9HA77 564 aaKnown RBP6.38□□□□□ -1.39
VBP1-204ENST00000625964 ABCB6Q9NP58 842 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms