RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 ZNF384Q8TF68 577 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 CD209Q9NNX6 404 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 CFAP45Q9UL16 551 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 MAST2Q6P0Q8 1798 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
PCF11-207ENST00000624931 PRDX5P30044 214 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 DMTNQ08495 405 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
PCF11-207ENST00000624931 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 LEO1Q8WVC0 666 aaPredicted RBP20.53■□□□□ 0.88
PCF11-207ENST00000624931 FEZ1Q99689 392 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 CHD4Q14839 1912 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 MBD4O95243 580 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 LIG1P18858 919 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 KCNA3P22001 575 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 ZNF75DP51815 510 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 GRIK5Q16478 980 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 ATL3Q6DD88 541 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 MIGA1Q8NAN2 632 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 CBX8Q9HC52 389 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 DACT1Q9NYF0 836 aa20.52■□□□□ 0.88
PCF11-207ENST00000624931 SNED1Q8TER0 1413 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 SMTNL1A8MU46 457 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 RIOK3O14730 519 aaKnown RBP20.51■□□□□ 0.87
PCF11-207ENST00000624931 CYP7A1P22680 504 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 POLD1P28340 1107 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 C17orf53Q8N3J3 647 aaPredicted RBP20.51■□□□□ 0.87
PCF11-207ENST00000624931 SPC24Q8NBT2 197 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 LLPHQ9BRT6 129 aaKnown RBP20.51■□□□□ 0.87
PCF11-207ENST00000624931 DSCC1Q9BVC3 393 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
PCF11-207ENST00000624931 DOK7Q18PE1 504 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 ANO6Q4KMQ2 910 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
PCF11-207ENST00000624931 C21orf2O43822 256 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 IL1R1P14778 569 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 PPP4R3BQ5MIZ7 849 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 SARM1Q6SZW1 724 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 DRC7Q8IY82 874 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
PCF11-207ENST00000624931 TMX4Q9H1E5 349 aaPredicted RBP20.5■□□□□ 0.87
PCF11-207ENST00000624931 PTGS1P23219 599 aa20.49■□□□□ 0.87
PCF11-207ENST00000624931 MECOMQ03112 1051 aa20.49■□□□□ 0.87
PCF11-207ENST00000624931 TOB2Q14106 344 aaPredicted RBP20.49■□□□□ 0.87
PCF11-207ENST00000624931 AIDAQ96BJ3 306 aa20.49■□□□□ 0.87
PCF11-207ENST00000624931 SGIP1Q9BQI5 828 aa20.49■□□□□ 0.87
PCF11-207ENST00000624931 TRIM5Q9C035 493 aa20.49■□□□□ 0.87
PCF11-207ENST00000624931 PPP1R1BQ9UD71 204 aaPredicted RBP20.49■□□□□ 0.87
PCF11-207ENST00000624931 CYP21A2P08686 494 aa20.48■□□□□ 0.87
PCF11-207ENST00000624931 HMGB1P09429 215 aaKnown RBP20.48■□□□□ 0.87
PCF11-207ENST00000624931 TPRNQ4KMQ1 711 aa20.48■□□□□ 0.87
PCF11-207ENST00000624931 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
PCF11-207ENST00000624931 CCDC186Q7Z3E2 898 aa20.48■□□□□ 0.87
PCF11-207ENST00000624931 NSUN4Q96CB9 384 aaKnown RBP20.48■□□□□ 0.87
PCF11-207ENST00000624931 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
PCF11-207ENST00000624931 ZNF165P49910 485 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 DYNLL1P63167 89 aaKnown RBP20.47■□□□□ 0.87
PCF11-207ENST00000624931 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
PCF11-207ENST00000624931 LUZP1Q86V48 1076 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 TTLL6Q8N841 843 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
PCF11-207ENST00000624931 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 PRKAB2O43741 272 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 WDR66Q8TBY9 1149 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 BICD2Q8TD16 824 aa20.47■□□□□ 0.87
PCF11-207ENST00000624931 SALL1Q9NSC2 1324 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 ZBTB22O15209 634 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 PTGER2P43116 358 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 HAND2P61296 217 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 RESTQ13127 1097 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 DHX8Q14562 1220 aaKnown RBP20.46■□□□□ 0.87
PCF11-207ENST00000624931 CAMK4Q16566 473 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 STOX1Q6ZVD7 989 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 FERMT3Q86UX7 667 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 FBXW7Q969H0 707 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
PCF11-207ENST00000624931 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
PCF11-207ENST00000624931 GOLGA6L19H0YKK7 550 aa20.45■□□□□ 0.86
PCF11-207ENST00000624931 MRFAP1L1Q96HT8 127 aa20.45■□□□□ 0.86
PCF11-207ENST00000624931 COA1Q9GZY4 146 aa20.45■□□□□ 0.86
PCF11-207ENST00000624931 H3BQV1 296 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 FGAP02671 866 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 ZSCAN20P17040 1043 aaPredicted RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 GTF2IP78347 998 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 EYA3Q99504 573 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 MXD3Q9BW11 206 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 CGNQ9P2M7 1197 aaKnown RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 LAMA4Q16363 1823 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 BRCA1P38398 1863 aaKnown RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 MAGEB6P1A0A0J9YX57 407 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 KIF20AO95235 890 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 APPP05067 770 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 LDHBP07195 334 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms