RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 SLITRK4Q8IW52 837 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 JARID2Q92833 1246 aaPredicted RBP8.36□□□□□ -1.07
ATRX-210ENST00000623316 GTPBP3Q969Y2 492 aaKnown RBP8.36□□□□□ -1.07
ATRX-210ENST00000623316 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
ATRX-210ENST00000623316 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 MUC3BQ9H195 1237 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 ATP13A2Q9NQ11 1180 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 PHF24Q9UPV7 400 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
ATRX-210ENST00000623316 SMNDC1O75940 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATRX-210ENST00000623316 F13A1P00488 732 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
ATRX-210ENST00000623316 PCSK7Q16549 785 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 CEP135Q66GS9 1140 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
ATRX-210ENST00000623316 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
ATRX-210ENST00000623316 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 FBXO27Q8NI29 283 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
ATRX-210ENST00000623316 CLEC4MQ9H2X3 399 aaPredicted RBP8.35□□□□□ -1.07
ATRX-210ENST00000623316 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 PPT2Q9UMR5 302 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 PCDHB5Q9Y5E4 795 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 NCOA1Q15788 1441 aa8.35□□□□□ -1.07
ATRX-210ENST00000623316 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.07
ATRX-210ENST00000623316 SMAD7O15105 426 aaKnown RBP8.34□□□□□ -1.07
ATRX-210ENST00000623316 TNNI3KQ59H18 835 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 FBXW10Q5XX13 1052 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
ATRX-210ENST00000623316 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 BSNDQ8WZ55 320 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 SHDQ96IW2 340 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
ATRX-210ENST00000623316 ZMYM3Q14202 1370 aa8.34□□□□□ -1.07
ATRX-210ENST00000623316 ADGBQ8N7X0 1667 aa8.34□□□□□ -1.08
ATRX-210ENST00000623316 SHANK2Q9UPX8 1470 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 DNMT1P26358 1616 aaKnown RBP8.33□□□□□ -1.08
ATRX-210ENST00000623316 CCDC85CA6NKD9 419 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 HSD3B2P26439 372 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 EIF6P56537 245 aaKnown RBP8.33□□□□□ -1.08
ATRX-210ENST00000623316 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
ATRX-210ENST00000623316 MICALL1Q8N3F8 863 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 DEPDC7Q96QD5 511 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 LRRC3Q9BY71 257 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 DNAJB12Q9NXW2 375 aaKnown RBP8.33□□□□□ -1.08
ATRX-210ENST00000623316 SNTG2Q9NY99 539 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 KIF15Q9NS87 1388 aa8.33□□□□□ -1.08
ATRX-210ENST00000623316 NME2P22392 152 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 ITGA6P23229 1130 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 ZNF165P49910 485 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 PCDH1Q08174 1060 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 MPP2Q14168 576 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 TRERF1Q96PN7 1200 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATRX-210ENST00000623316 ADGRL2O95490 1459 aa8.32□□□□□ -1.08
ATRX-210ENST00000623316 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 RRBP1Q9P2E9 1410 aaKnown RBP8.31□□□□□ -1.08
ATRX-210ENST00000623316 FER1L4A9Z1Z3 1794 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 RGS20O76081 388 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 BPNT1O95861 308 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 BMP6P22004 513 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 CTBSQ01459 385 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 SEPT6Q14141 434 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 LRRC14Q15048 493 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 FOXR1Q6PIV2 292 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 SULF2Q8IWU5 870 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 ANKRD30AQ9BXX3 1397 aa8.31□□□□□ -1.08
ATRX-210ENST00000623316 DUOX2Q9NRD8 1548 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 FAM221AA4D161 298 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 FAM177BA6PVY3 158 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 GFRA3O60609 400 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 B3GALT4O96024 378 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 CPB1P15086 417 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 PTPRAP18433 802 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 HSPA2P54652 639 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 RASA3Q14644 834 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 RASIP1Q5U651 963 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 GK5Q6ZS86 529 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 FAM35AQ86V20 835 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 PLD4Q96BZ4 506 aa8.3□□□□□ -1.08
ATRX-210ENST00000623316 FAM221BA6H8Z2 402 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 GIPRP48546 466 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 LRP10Q7Z4F1 713 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 FAM169BQ8N8A8 192 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
ATRX-210ENST00000623316 EMILIN2Q9BXX0 1053 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
ATRX-210ENST00000623316 AAASQ9NRG9 546 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms