RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 DZIP1Q86YF9 867 aaKnown RBP21.65■■□□□ 1.06
PCDHB2-202ENST00000622947 SPTY2D1Q68D10 685 aaPredicted RBP21.65■■□□□ 1.06
PCDHB2-202ENST00000622947 CTR9Q6PD62 1173 aa21.65■■□□□ 1.06
PCDHB2-202ENST00000622947 SMAP1Q8IYB5 467 aaPredicted RBP21.65■■□□□ 1.06
PCDHB2-202ENST00000622947 RXRAP19793 462 aa21.64■■□□□ 1.06
PCDHB2-202ENST00000622947 TMC4Q7Z404 712 aa21.64■■□□□ 1.06
PCDHB2-202ENST00000622947 DEFB132Q7Z7B7 95 aa21.64■■□□□ 1.06
PCDHB2-202ENST00000622947 ZKSCAN3Q9BRR0 538 aa21.64■■□□□ 1.06
PCDHB2-202ENST00000622947 DCP1AQ9NPI6 582 aaPredicted RBP21.64■■□□□ 1.06
PCDHB2-202ENST00000622947 CCDC173Q0VFZ6 552 aa21.64■■□□□ 1.05
PCDHB2-202ENST00000622947 MASTLQ96GX5 879 aa21.64■■□□□ 1.05
PCDHB2-202ENST00000622947 TMEM87BQ96K49 555 aa21.64■■□□□ 1.05
PCDHB2-202ENST00000622947 CNNM2Q9H8M5 875 aa21.64■■□□□ 1.05
PCDHB2-202ENST00000622947 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 USP17L21D6R901 530 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 RIMBP2O15034 1052 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 ZSCAN30Q86W11 494 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 TMEM87AQ8NBN3 555 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 KRT23Q9C075 422 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 NCLP19338 710 aaKnown RBP21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 FOSBP53539 338 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 TMEM67Q5HYA8 995 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 PPP1R9BQ96SB3 815 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 RBM27Q9P2N5 1060 aaKnown RBP21.63■■□□□ 1.05
PCDHB2-202ENST00000622947 SLX4Q8IY92 1834 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 ALDH1B1P30837 517 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 CAVIN1Q6NZI2 390 aaKnown RBP21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 GIMAP6Q6P9H5 292 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 SGMS1Q86VZ5 419 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 MYL10Q9BUA6 226 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
PCDHB2-202ENST00000622947 HMGN5P82970 282 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 FAM184AQ8NB25 1140 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 CRNKL1Q9BZJ0 848 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 LAMB1P07942 1786 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 IFIT3O14879 490 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 CYP2D6P10635 497 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 PDIA4P13667 645 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 CDC27P30260 824 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 ADD1P35611 737 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 GAS2L3Q86XJ1 694 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 SH3RF3Q8TEJ3 882 aaPredicted RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 ZNF622Q969S3 477 aaKnown RBP eCLIP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 MKRN1Q9UHC7 482 aaKnown RBP21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 ATP6V1DQ9Y5K8 247 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 CDK5RAP2Q96SN8 1893 aa21.61■■□□□ 1.05
PCDHB2-202ENST00000622947 FIBPO43427 364 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 LIFRP42702 1097 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 C2CD5Q86YS7 1000 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 MPNDQ8N594 471 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 FAM217BQ9NTX9 383 aaPredicted RBP21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 FGRP09769 529 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 CHRNA5P30532 468 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 RESTQ13127 1097 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 TMED8Q6PL24 325 aaPredicted RBP21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 RNF41Q9H4P4 317 aaPredicted RBP21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 TMEM63CQ9P1W3 806 aa21.6■■□□□ 1.05
PCDHB2-202ENST00000622947 PRDM1O75626 825 aa21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 MFSD14BQ5SR56 506 aa21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 CCDC144CPQ8IYA2 1237 aa21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 MTERF4Q7Z6M4 381 aaKnown RBP21.59■■□□□ 1.05
PCDHB2-202ENST00000622947 USP17L8P0C7I0 530 aa21.58■■□□□ 1.05
PCDHB2-202ENST00000622947 METAP2P50579 478 aaKnown RBP eCLIP21.58■■□□□ 1.05
PCDHB2-202ENST00000622947 SLC4A8Q2Y0W8 1093 aa21.58■■□□□ 1.05
PCDHB2-202ENST00000622947 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.04
PCDHB2-202ENST00000622947 H3BQV1 296 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 PPP4CP60510 307 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 GTF2IP78347 998 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 GUCY1B3Q02153 619 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 DPP8Q6V1X1 898 aaPredicted RBP21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 GJB4Q9NTQ9 266 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 FAM205AQ6ZU69 1335 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 ZBTB43O43298 467 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 SEC23AQ15436 765 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 NTRK3Q16288 839 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 DOK7Q18PE1 504 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 NFXL1Q6ZNB6 911 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 MYH15Q9Y2K3 1946 aa21.57■■□□□ 1.04
PCDHB2-202ENST00000622947 MSNP26038 577 aaKnown RBP21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 ZSCAN23Q3MJ62 389 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 OTUD7BQ6GQQ9 843 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 COA1Q9GZY4 146 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 ECM29Q5VYK3 1845 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 H0YIN7 160 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 IGSF3O75054 1194 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 GSTO1P78417 241 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 SBK1Q52WX2 424 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 TTC6Q86TZ1 520 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 CERS5Q8N5B7 392 aa21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 ZC3H12CQ9C0D7 883 aaKnown RBP21.56■■□□□ 1.04
PCDHB2-202ENST00000622947 TFIP11Q9UBB9 837 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms