RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KRT32Q14532 448 aa21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 RABEP1Q15276 862 aa21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 CTR9Q6PD62 1173 aa21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 ARPP21Q9UBL0 812 aaPredicted RBP21.17■□□□□ 0.98
PTCHD3-202ENST00000622555 PPARAQ07869 468 aa21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 ADCK5Q3MIX3 580 aa21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 ANP32EQ9BTT0 268 aa21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 SAP30BPQ9UHR5 308 aaKnown RBP21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 ZC3H4Q9UPT8 1303 aaKnown RBP21.16■□□□□ 0.98
PTCHD3-202ENST00000622555 CYP2D7A0A087X1C5 515 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 H7C1D1 291 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 CACNB3P54284 484 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 CTDSPL2Q05D32 466 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 DPY19L2Q6NUT2 758 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 AMOTL1Q8IY63 956 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 ZBED3Q96IU2 234 aaPredicted RBP21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 DDX4Q9NQI0 724 aaKnown RBP21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 GPRC5DQ9NZD1 345 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 TMOD2Q9NZR1 351 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 E7EWF7 191 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 PSMA5P28066 241 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 NFIAQ12857 509 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 SLC4A8Q2Y0W8 1093 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 SBK1Q52WX2 424 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 SAMD7Q7Z3H4 446 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 TBC1D10CQ8IV04 446 aa21.15■□□□□ 0.98
PTCHD3-202ENST00000622555 CLRN2A0PK11 232 aa21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 MYO1BO43795 1136 aa21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 CYP2D6P10635 497 aa21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 CASTP20810 708 aaKnown RBP21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 IDI2Q9BXS1 227 aa21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 UPF3BQ9BZI7 483 aaKnown RBP21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 ZNF70Q9UC06 446 aaPredicted RBP21.14■□□□□ 0.97
PTCHD3-202ENST00000622555 WNT10BO00744 389 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 EGFRP00533 1210 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 KIF4BQ2VIQ3 1234 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 NBPF9Q3BBW0 867 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 SPDYE2Q495Y8 402 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 TM6SF1Q9BZW5 370 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 ANAPC4Q9UJX5 808 aa21.13■□□□□ 0.97
PTCHD3-202ENST00000622555 LMOD1P29536 600 aaPredicted RBP21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 STK11IPQ8N1F8 1099 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 NEK1Q96PY6 1258 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 OSBPL5Q9H0X9 879 aaPredicted RBP21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 SMIM22K7EJ46 135 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 EPS15P42566 896 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 NEK4P51957 841 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 EVX2Q03828 476 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 TCP10Q12799 353 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 C12orf60Q5U649 245 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 VEZTQ9HBM0 779 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 FAM198AQ9UFP1 575 aa21.12■□□□□ 0.97
PTCHD3-202ENST00000622555 NPM3O75607 178 aaKnown RBP21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 SLC3A2P08195 630 aaKnown RBP21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 CPA1P15085 419 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 MFSD6Q6ZSS7 791 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 STAG1Q8WVM7 1258 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 ZSWIM6Q9HCJ5 1215 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 CYP46A1Q9Y6A2 500 aa21.11■□□□□ 0.97
PTCHD3-202ENST00000622555 TCP10L2B9ZVM9 353 aa21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 TRDNQ13061 729 aa21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 RALYLQ86SE5 291 aaKnown RBP21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 NCOA7Q8NI08 942 aa21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 RNF41Q9H4P4 317 aaPredicted RBP21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 NEDD4P46934 1319 aa21.1■□□□□ 0.97
PTCHD3-202ENST00000622555 GLTPD2A6NH11 291 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 ENTPD3O75355 529 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 PLCD1P51178 756 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 RUFY3Q7L099 469 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 ZFPM1Q8IX07 1006 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 TRPM4Q8TD43 1214 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 TOMM22Q9NS69 142 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 TACC3Q9Y6A5 838 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 ST18O60284 1047 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 HMGB1P09429 215 aaKnown RBP21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 TTC6Q86TZ1 520 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 CNNM2Q9H8M5 875 aa21.09■□□□□ 0.97
PTCHD3-202ENST00000622555 ROBO3Q96MS0 1386 aa21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 RPS6KB1P23443 525 aa21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 RRP12Q5JTH9 1297 aaKnown RBP21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 FKBP1CQ5VVH2 108 aa21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 ZSCAN29Q8IWY8 852 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 L3MBTL3Q96JM7 780 aaPredicted RBP21.08■□□□□ 0.97
PTCHD3-202ENST00000622555 MYH8P13535 1937 aa21.08■□□□□ 0.96
PTCHD3-202ENST00000622555 HLA-DOAP06340 250 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 DYNLL2Q96FJ2 89 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 KRT23Q9C075 422 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 DHX36Q9H2U1 1008 aaKnown RBP21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 PDRG1Q9NUG6 133 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms