RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 GPC2Q8N158 579 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 SH3RF3Q8TEJ3 882 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 PRMT6Q96LA8 375 aaPredicted RBP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 NACAP1Q9BZK3 213 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 ATP8A2Q9NTI2 1148 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 USP40Q9NVE5 1235 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 CNOT7Q9UIV1 285 aaKnown RBP9.58□□□□□ -0.88
CPNE3-209ENST00000620393 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
CPNE3-209ENST00000620393 ZNF541Q9H0D2 1346 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 SLC27A2O14975 620 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 ANAPC15P60006 121 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 DLGAP5Q15398 846 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 IER5LQ5T953 404 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 CREB3L3Q68CJ9 461 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 DPY19L2Q6NUT2 758 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 CDC42EP5Q6NZY7 148 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 ZNF467Q7Z7K2 595 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-209ENST00000620393 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 SDR42E1Q8WUS8 393 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 IL17RAQ96F46 866 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
CPNE3-209ENST00000620393 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
CPNE3-209ENST00000620393 PCDHAC2Q9Y5I4 1007 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 FER1L6Q2WGJ9 1857 aa9.57□□□□□ -0.88
CPNE3-209ENST00000620393 CACNA1SQ13698 1873 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 H7C1D1 291 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 ZNF213O14771 459 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 DDNO94850 711 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 ZKSCAN1P17029 563 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 USP5P45974 858 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 IMMTQ16891 758 aaKnown RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 MAMSTRQ6ZN01 415 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 TGFBRAP1Q8WUH2 860 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 KIF2CQ99661 725 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 NAPBQ9H115 298 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 EPB41L4AQ9HCS5 686 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 MYOZ2Q9NPC6 264 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 DCP1AQ9NPI6 582 aaPredicted RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 PALD1Q9ULE6 856 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 RBM19Q9Y4C8 960 aaKnown RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 SNX14Q9Y5W7 946 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 GOLGB1Q14789 3259 aaKnown RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
CPNE3-209ENST00000620393 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
CPNE3-209ENST00000620393 CHD4Q14839 1912 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 ARFGEF1Q9Y6D6 1849 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 USP17L21D6R901 530 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
CPNE3-209ENST00000620393 CYP21A2P08686 494 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 TDO2P48775 406 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 SBK1Q52WX2 424 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 CTR9Q6PD62 1173 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 IDI2Q9BXS1 227 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 TDRD3Q9H7E2 651 aaKnown RBP9.55□□□□□ -0.88
CPNE3-209ENST00000620393 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
CPNE3-209ENST00000620393 SHTN1A0MZ66 631 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 GLTPD2A6NH11 291 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 WNT10BO00744 389 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 HAND2P61296 217 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 KRT32Q14532 448 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
CPNE3-209ENST00000620393 C12orf60Q5U649 245 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 MAPKAPK5Q8IW41 473 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 MCM9Q9NXL9 1143 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 ZNF70Q9UC06 446 aaPredicted RBP9.54□□□□□ -0.88
CPNE3-209ENST00000620393 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 SCN9AQ15858 1988 aa9.54□□□□□ -0.88
CPNE3-209ENST00000620393 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 MYO1BO43795 1136 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 ENTPD3O75355 529 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 POLR3DP05423 398 aaPredicted RBP9.53□□□□□ -0.88
CPNE3-209ENST00000620393 PSMA5P28066 241 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 EPS15P42566 896 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 PPARAQ07869 468 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 NFIAQ12857 509 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 RABEP1Q15276 862 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 FKBP1CQ5VVH2 108 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
CPNE3-209ENST00000620393 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 DDX4Q9NQI0 724 aaKnown RBP9.53□□□□□ -0.88
CPNE3-209ENST00000620393 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 ARPP21Q9UBL0 812 aaPredicted RBP9.53□□□□□ -0.88
CPNE3-209ENST00000620393 FAM198AQ9UFP1 575 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 TAF6LQ9Y6J9 622 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 FLT1P17948 1338 aa9.53□□□□□ -0.88
CPNE3-209ENST00000620393 CYP2D7A0A087X1C5 515 aa9.52□□□□□ -0.89
CPNE3-209ENST00000620393 E7EWF7 191 aa9.52□□□□□ -0.89
CPNE3-209ENST00000620393 EGFRP00533 1210 aa9.52□□□□□ -0.89
CPNE3-209ENST00000620393 SLC3A2P08195 630 aaKnown RBP9.52□□□□□ -0.89
CPNE3-209ENST00000620393 FGRP09769 529 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms