RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CCDC183Q5T5S1 534 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 MICU3Q86XE3 530 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 SP8Q8IXZ3 490 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 C8orf76Q96K31 380 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 ERICH2A1L162 156 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 PCP11498 1178 aaKnown RBP22.25■■□□□ 1.15
PSPC1-206ENST00000619300 IL1R1P14778 569 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 RXRAP19793 462 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 CDC27P30260 824 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 GUCY1B3Q02153 619 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 WTAPQ15007 396 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 SYNE3Q6ZMZ3 975 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 TBC1D16Q8TBP0 767 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 DCP1AQ9NPI6 582 aaPredicted RBP22.25■■□□□ 1.15
PSPC1-206ENST00000619300 POLLQ9UGP5 575 aa22.25■■□□□ 1.15
PSPC1-206ENST00000619300 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 USP17L12C9JPN9 530 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 USP17L21D6R901 530 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 FGRP09769 529 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 GSTO1P78417 241 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 RGS22Q8NE09 1264 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 FBXO18Q8NFZ0 1043 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 ZKSCAN3Q9BRR0 538 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 FAM217BQ9NTX9 383 aaPredicted RBP22.24■■□□□ 1.15
PSPC1-206ENST00000619300 GOLGA8AA7E2F4 631 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 SMIM22K7EJ46 135 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 LETM1O95202 739 aaPredicted RBP22.24■■□□□ 1.15
PSPC1-206ENST00000619300 ATL3Q6DD88 541 aa22.24■■□□□ 1.15
PSPC1-206ENST00000619300 PPEF1O14829 653 aaPredicted RBP22.23■■□□□ 1.15
PSPC1-206ENST00000619300 SRGNP10124 158 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 UBAC1Q9BSL1 405 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 MYL10Q9BUA6 226 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 CHD4Q14839 1912 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 NTRK3Q16288 839 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 CCDC144CPQ8IYA2 1237 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 RBSNQ9H1K0 784 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 ATP6V0A2Q9Y487 856 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
PSPC1-206ENST00000619300 MMP10P09238 476 aa22.22■■□□□ 1.15
PSPC1-206ENST00000619300 NPR1P16066 1061 aa22.22■■□□□ 1.15
PSPC1-206ENST00000619300 NASPP49321 788 aaPredicted RBP22.22■■□□□ 1.15
PSPC1-206ENST00000619300 SBK1Q52WX2 424 aa22.22■■□□□ 1.15
PSPC1-206ENST00000619300 ZNF396Q96N95 335 aaPredicted RBP22.22■■□□□ 1.15
PSPC1-206ENST00000619300 GOLGA6L4A6NEF3 574 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 C6orf229H3BNL8 230 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 LDHCP07864 332 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 GRIK5Q16478 980 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 OTUD7BQ6GQQ9 843 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 NID2Q14112 1375 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 PDE6BP35913 854 aa22.21■■□□□ 1.15
PSPC1-206ENST00000619300 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-206ENST00000619300 ARPP21Q9UBL0 812 aaPredicted RBP22.21■■□□□ 1.15
PSPC1-206ENST00000619300 BAG3O95817 575 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
PSPC1-206ENST00000619300 RCAN1P53805 252 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 PPP4CP60510 307 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 SEC23AQ15436 765 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 RCOR1Q9UKL0 485 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 MAST2Q6P0Q8 1798 aa22.2■■□□□ 1.14
PSPC1-206ENST00000619300 ALDH1B1P30837 517 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 PHKBQ93100 1093 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 ZSCAN10Q96SZ4 725 aaPredicted RBP22.19■■□□□ 1.14
PSPC1-206ENST00000619300 ALG1Q9BT22 464 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 RANBP6O60518 1105 aaKnown RBP22.19■■□□□ 1.14
PSPC1-206ENST00000619300 SLC3A2P08195 630 aaKnown RBP22.19■■□□□ 1.14
PSPC1-206ENST00000619300 DIXDC1Q155Q3 683 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 KLHL34Q8N239 644 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 TSPY26PQ9H489 355 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
PSPC1-206ENST00000619300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.19■■□□□ 1.14
PSPC1-206ENST00000619300 TNKSO95271 1327 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 CCDC88AQ3V6T2 1871 aa22.19■■□□□ 1.14
PSPC1-206ENST00000619300 ORC4O43929 436 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 PRDM1O75626 825 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 RTN1Q16799 776 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 PGBD1Q96JS3 809 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 GJB4Q9NTQ9 266 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 MKRN1Q9UHC7 482 aaKnown RBP22.18■■□□□ 1.14
PSPC1-206ENST00000619300 CCDC196A0A1B0GTZ2 297 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 IFNAR1P17181 557 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 CEBPZQ03701 1054 aaKnown RBP22.18■■□□□ 1.14
PSPC1-206ENST00000619300 SSRP1Q08945 709 aaKnown RBP22.18■■□□□ 1.14
PSPC1-206ENST00000619300 IQCA1Q86XH1 822 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 ZNF654Q8IZM8 581 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 USP28Q96RU2 1077 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 NOL10Q9BSC4 688 aaKnown RBP22.18■■□□□ 1.14
PSPC1-206ENST00000619300 MCM9Q9NXL9 1143 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 NRXN2Q9P2S2 1712 aa22.18■■□□□ 1.14
PSPC1-206ENST00000619300 USP5P45974 858 aa22.17■■□□□ 1.14
PSPC1-206ENST00000619300 BRAPQ7Z569 592 aa22.17■■□□□ 1.14
PSPC1-206ENST00000619300 ENAHQ8N8S7 591 aaPredicted RBP22.17■■□□□ 1.14
PSPC1-206ENST00000619300 FANCBQ8NB91 859 aa22.17■■□□□ 1.14
PSPC1-206ENST00000619300 SH3RF3Q8TEJ3 882 aaPredicted RBP22.17■■□□□ 1.14
PSPC1-206ENST00000619300 TBC1D22AQ8WUA7 517 aa22.17■■□□□ 1.14
PSPC1-206ENST00000619300 STK36Q9NRP7 1315 aa22.17■■□□□ 1.14
PSPC1-206ENST00000619300 BAZ2AQ9UIF9 1905 aaKnown RBP22.17■■□□□ 1.14
PSPC1-206ENST00000619300 FMNL1O95466 1100 aaPredicted RBP22.16■■□□□ 1.14
PSPC1-206ENST00000619300 CYP2D6P10635 497 aa22.16■■□□□ 1.14
PSPC1-206ENST00000619300 LIG1P18858 919 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms