RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RPAP1Q9BWH6 1393 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 PPM1FP49593 454 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 RC3H1Q5TC82 1133 aaKnown RBP11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 FAM160B1Q5W0V3 765 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 RUFY3Q7L099 469 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 KRT26Q7Z3Y9 468 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 MYO3AQ8NEV4 1616 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 ATP8A2Q9NTI2 1148 aa11.04□□□□□ -0.64
TNFRSF9-204ENST00000615230 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 QRICH2Q9H0J4 1663 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 GOLGA6L9A6NEM1 432 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 ARHGAP29Q52LW3 1261 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 ZBTB40Q9NUA8 1239 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 ABT1Q9ULW3 272 aaKnown RBP11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 NEFHP12036 1026 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 CTNNA2P26232 953 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 CERKLQ49MI3 558 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 SLC17A8Q8NDX2 589 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 GOLGA1Q92805 767 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 MMP14P50281 582 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 CALUO43852 315 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 HSPA1LP34931 641 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 GSDMDP57764 484 aa11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
TNFRSF9-204ENST00000615230 BTDP43251 543 aa11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 YWHAEP62258 255 aaKnown RBP11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 KCTD2Q14681 263 aa11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 JPH2Q9BR39 696 aaPredicted RBP11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.64
TNFRSF9-204ENST00000615230 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 SYKP43405 635 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 TRIM47Q96LD4 638 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 IWS1Q96ST2 819 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 COL15A1P39059 1388 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 GPAA1O43292 621 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 TAF5LO75529 589 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 GUCY1B3Q02153 619 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 SV2BQ7L1I2 683 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 CCDC91Q7Z6B0 441 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 FILIP1Q7Z7B0 1213 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 AP5M1Q9H0R1 490 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 DDAH1O94760 285 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 ACTN2P35609 894 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 IL17REQ8NFR9 667 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 NUP88Q99567 741 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 PPRC1Q5VV67 1664 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 RILPL1Q5EBL4 403 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 ARHGEF16Q5VV41 709 aa11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 PUF60Q9UHX1 559 aaKnown RBP11.02□□□□□ -0.65
TNFRSF9-204ENST00000615230 PIK3C2BO00750 1634 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 GBP3Q9H0R5 595 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 FRMD4BQ9Y2L6 1034 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 ASIC1P78348 528 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 PPARAQ07869 468 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 PDE4DQ08499 809 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 WDR44Q5JSH3 913 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZNF532Q9HCE3 1301 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZSCAN22P10073 491 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 ABCB5Q2M3G0 1257 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 BSDC1Q9NW68 430 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 GCOM1H8Y6P7 765 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 POLR2MP0CAP2 368 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 P4HA1P13674 534 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 MAPKAPK5Q8IW41 473 aa11.01□□□□□ -0.65
TNFRSF9-204ENST00000615230 E9PCH4 1651 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 MAP7D2Q96T17 732 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 KIF5CO60282 957 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 UBE2HP62256 183 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 ERFEQ4G0M1 354 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 SLFN12Q8IYM2 578 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 CCDC112Q8NEF3 446 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 ANGEL1Q9UNK9 670 aaKnown RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 FOSP01100 380 aaPredicted RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 TDRD12Q587J7 1177 aaKnown RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 KIFAP3Q92845 792 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 TSNARE1Q96NA8 513 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 MMP10P09238 476 aa11□□□□□ -0.65
TNFRSF9-204ENST00000615230 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
TNFRSF9-204ENST00000615230 GTF3C2Q8WUA4 911 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms