RNA–Protein interactions for RNA: ENST00000613023.1

RNVU1-19-201, Transcript of RNA, variant U1 small nuclear 19, humanhuman

BASIC

Gene RNVU1-19, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-19-201ENST00000613023 CREB3L3Q68CJ9 461 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 TEX11Q8IYF3 940 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 SH3RF3Q8TEJ3 882 aaPredicted RBP9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 EHD4Q9H223 541 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 ADARB2Q9NS39 739 aaKnown RBP9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 PPP2R3BQ9Y5P8 575 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 WDR19Q8NEZ3 1342 aa9.46□□□□□ -0.9
RNVU1-19-201ENST00000613023 ZNF213O14771 459 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 SLC27A2O14975 620 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 CYP21A2P08686 494 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 USP5P45974 858 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 TDO2P48775 406 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 KIF4BQ2VIQ3 1234 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 USP50Q70EL3 339 aaPredicted RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 APOBEC3FQ8IUX4 373 aaKnown RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 AMOTL1Q8IY63 956 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 FBXL16Q8N461 479 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 STAG1Q8WVM7 1258 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 PRMT6Q96LA8 375 aaPredicted RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 OSBPL5Q9H0X9 879 aaPredicted RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 RNF41Q9H4P4 317 aaPredicted RBP9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 GJA3Q9Y6H8 435 aa9.45□□□□□ -0.9
RNVU1-19-201ENST00000613023 PRKAB2O43741 272 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 ORC4O43929 436 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 DDNO94850 711 aaPredicted RBP9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 SLC3A2P08195 630 aaKnown RBP9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 PSMA5P28066 241 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 TNNI2P48788 182 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 GABPAQ06546 454 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 CTR9Q6PD62 1173 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 SDR42E1Q8WUS8 393 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 FAM151AQ8WW52 585 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 KIF2CQ99661 725 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 ZNF287Q9HBT7 754 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 ZNF70Q9UC06 446 aaPredicted RBP9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 FAM198AQ9UFP1 575 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 PGAP2Q9UHJ9 254 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 SNX14Q9Y5W7 946 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 POLR2AP24928 1970 aaKnown RBP9.44□□□□□ -0.9
RNVU1-19-201ENST00000613023 CNTNAP1P78357 1384 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 PLIN4Q96Q06 1357 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 APPP05067 770 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 MAP3K10Q02779 954 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 PPARAQ07869 468 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 RABEP1Q15276 862 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 AKNAD1Q5T1N1 836 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 PNMA8AQ86V59 439 aaPredicted RBP9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 HOOK2Q96ED9 719 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 TDRD3Q9H7E2 651 aaKnown RBP9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 DDX4Q9NQI0 724 aaKnown RBP9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
RNVU1-19-201ENST00000613023 ATAD5Q96QE3 1844 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 USP17L21D6R901 530 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 TBC1D12O60347 775 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 HLA-DOAP06340 250 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 PDE4BQ07343 736 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 FOXP4Q8IVH2 680 aaPredicted RBP9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 KRT23Q9C075 422 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 NBPF3Q9H094 633 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 PI4KBQ9UBF8 816 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 HERC5Q9UII4 1024 aaKnown RBP9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
RNVU1-19-201ENST00000613023 DOCK1Q14185 1865 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 POTECB2RU33 542 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 E7EWF7 191 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 EPHX2P34913 555 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 EPS15P42566 896 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 MCM2P49736 904 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 NFIAQ12857 509 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 TRDNQ13061 729 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 SAMD7Q7Z3H4 446 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 MAPKAPK5Q8IW41 473 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 NCOA7Q8NI08 942 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 AGXT2Q9BYV1 514 aa9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 TAF1DQ9H5J8 278 aaPredicted RBP9.41□□□□□ -0.9
RNVU1-19-201ENST00000613023 GINM1Q9NU53 330 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 237.6 ms