RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 STAG1Q8WVM7 1258 aa19.61■□□□□ 0.73
PMF1-206ENST00000606952 ALDH8A1Q9H2A2 487 aaPredicted RBP19.61■□□□□ 0.73
PMF1-206ENST00000606952 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 HMGB1P09429 215 aaKnown RBP19.6■□□□□ 0.73
PMF1-206ENST00000606952 USP5P45974 858 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 TBC1D10CQ8IV04 446 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 TGFBRAP1Q8WUH2 860 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 TTC14Q96N46 770 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 TAOK2Q9UL54 1235 aa19.6■□□□□ 0.73
PMF1-206ENST00000606952 WDR19Q8NEZ3 1342 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 GMPSP49915 693 aaPredicted RBP19.59■□□□□ 0.73
PMF1-206ENST00000606952 DLGAP5Q15398 846 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 C12orf60Q5U649 245 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 FKBP1CQ5VVH2 108 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 PRMT6Q96LA8 375 aaPredicted RBP19.59■□□□□ 0.73
PMF1-206ENST00000606952 JAKMIP1Q96N16 626 aaKnown RBP19.59■□□□□ 0.73
PMF1-206ENST00000606952 NEK1Q96PY6 1258 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 PCDHAC2Q9Y5I4 1007 aa19.59■□□□□ 0.73
PMF1-206ENST00000606952 ATRNL1Q5VV63 1379 aa19.58■□□□□ 0.73
PMF1-206ENST00000606952 USP17L12C9JPN9 530 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 USP17L21D6R901 530 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.72
PMF1-206ENST00000606952 HAND2P61296 217 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 SPDYE2Q495Y8 402 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 AKNAD1Q5T1N1 836 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 BLOC1S2Q6QNY1 142 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 RUFY3Q7L099 469 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 MAPKAPK5Q8IW41 473 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 MB21D2Q8IYB1 491 aaPredicted RBP19.58■□□□□ 0.72
PMF1-206ENST00000606952 FBXL16Q8N461 479 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.72
PMF1-206ENST00000606952 MYOZ2Q9NPC6 264 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 DDX4Q9NQI0 724 aaKnown RBP19.58■□□□□ 0.72
PMF1-206ENST00000606952 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
PMF1-206ENST00000606952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.58■□□□□ 0.72
PMF1-206ENST00000606952 ST18O60284 1047 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 ENTPD3O75355 529 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 RPS6KB1P23443 525 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
PMF1-206ENST00000606952 CNNM2Q9H8M5 875 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 CYP46A1Q9Y6A2 500 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 TACC3Q9Y6A5 838 aa19.57■□□□□ 0.72
PMF1-206ENST00000606952 ORC4O43929 436 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 MCM2P49736 904 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 NEK4P51957 841 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 RBM5P52756 815 aaKnown RBP eCLIP19.56■□□□□ 0.72
PMF1-206ENST00000606952 EXOSC10Q01780 885 aaKnown RBP19.56■□□□□ 0.72
PMF1-206ENST00000606952 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 MTA3Q9BTC8 594 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 GPRC5DQ9NZD1 345 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
PMF1-206ENST00000606952 SCN4AP35499 1836 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 WNT10BO00744 389 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 NFIAQ12857 509 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 DHX32Q7L7V1 743 aaKnown RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 MICALL2Q8IY33 904 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 AMOTL1Q8IY63 956 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 L3MBTL3Q96JM7 780 aaPredicted RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 WDR90Q96KV7 1748 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 AGXT2Q9BYV1 514 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 UPF3BQ9BZI7 483 aaKnown RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 TDRD3Q9H7E2 651 aaKnown RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 ZNF70Q9UC06 446 aaPredicted RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 CNOT7Q9UIV1 285 aaKnown RBP19.55■□□□□ 0.72
PMF1-206ENST00000606952 GJA3Q9Y6H8 435 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 MYH8P13535 1937 aa19.55■□□□□ 0.72
PMF1-206ENST00000606952 NEDD4P46934 1319 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 MINDY4BA8MYZ0 360 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 CD2BP2O95400 341 aaKnown RBP19.54■□□□□ 0.72
PMF1-206ENST00000606952 CTDSPL2Q05D32 466 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 GABPAQ06546 454 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 COL9A3Q14050 684 aaPredicted RBP19.54■□□□□ 0.72
PMF1-206ENST00000606952 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 KRT23Q9C075 422 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 EHD4Q9H223 541 aa19.54■□□□□ 0.72
PMF1-206ENST00000606952 DHX36Q9H2U1 1008 aaKnown RBP19.54■□□□□ 0.72
PMF1-206ENST00000606952 CYP2D7A0A087X1C5 515 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 SHTN1A0MZ66 631 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 SLC3A2P08195 630 aaKnown RBP19.53■□□□□ 0.72
PMF1-206ENST00000606952 CYP2D6P10635 497 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 TRDNQ13061 729 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 BECN1Q14457 450 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 MFSD6Q6ZSS7 791 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 TTC6Q86TZ1 520 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 FAM83AQ86UY5 434 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
PMF1-206ENST00000606952 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 TMOD2Q9NZR1 351 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 UTRNP46939 3433 aa19.53■□□□□ 0.72
PMF1-206ENST00000606952 GREB1LQ9C091 1923 aaPredicted RBP19.53■□□□□ 0.72
PMF1-206ENST00000606952 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 MYO1BO43795 1136 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 PLCD1P51178 756 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 ANTXR2P58335 489 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 KIF4BQ2VIQ3 1234 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 C16orf86Q6ZW13 317 aa19.52■□□□□ 0.72
PMF1-206ENST00000606952 RALYLQ86SE5 291 aaKnown RBP19.52■□□□□ 0.72
PMF1-206ENST00000606952 CNTNAP1P78357 1384 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms