RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
LINC01235-201ENST00000604724 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 ZBTB43O43298 467 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 PRDM1O75626 825 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 RXRBP28702 533 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 ZNF804AQ7Z570 1209 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 DZIP1Q86YF9 867 aaKnown RBP12.68□□□□□ -0.38
LINC01235-201ENST00000604724 PHKBQ93100 1093 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 SCAND2PQ9GZW5 306 aaPredicted RBP12.68□□□□□ -0.38
LINC01235-201ENST00000604724 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
LINC01235-201ENST00000604724 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 USP17L21D6R901 530 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 UBE2Q2LH0YL09 131 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 CCDC183Q5T5S1 534 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 GGA1Q9UJY5 639 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 LAMB1P07942 1786 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 GOLGA8AA7E2F4 631 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 ZBTB22O15209 634 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 BBOX1O75936 387 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 NTRK3Q16288 839 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 C8orf76Q96K31 380 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 SLC12A7Q9Y666 1083 aa12.67□□□□□ -0.38
LINC01235-201ENST00000604724 COL11A2P13942 1736 aaPredicted RBP12.67□□□□□ -0.38
LINC01235-201ENST00000604724 CCDC69A6NI79 296 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
LINC01235-201ENST00000604724 LIG1P18858 919 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 WTAPQ15007 396 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 NLGN1Q8N2Q7 840 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 FBXO18Q8NFZ0 1043 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 TBC1D16Q8TBP0 767 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 CYP2D6P10635 497 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 ATP2B4P23634 1241 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 SLC4A8Q2Y0W8 1093 aa12.66□□□□□ -0.38
LINC01235-201ENST00000604724 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
LINC01235-201ENST00000604724 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
LINC01235-201ENST00000604724 TNKSO95271 1327 aa12.65□□□□□ -0.38
LINC01235-201ENST00000604724 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
LINC01235-201ENST00000604724 MMP10P09238 476 aa12.65□□□□□ -0.38
LINC01235-201ENST00000604724 GIMAP6Q6P9H5 292 aa12.65□□□□□ -0.38
LINC01235-201ENST00000604724 ESR2Q92731 530 aa12.65□□□□□ -0.38
LINC01235-201ENST00000604724 RGS17Q9UGC6 210 aaPredicted RBP12.65□□□□□ -0.38
LINC01235-201ENST00000604724 KIF28PB7ZC32 967 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 SRGNP10124 158 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 IL1R1P14778 569 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.39
LINC01235-201ENST00000604724 SEC23AQ15436 765 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 RNF214Q8ND24 703 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 UBAC1Q9BSL1 405 aa12.65□□□□□ -0.39
LINC01235-201ENST00000604724 NID2Q14112 1375 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 ERICH2A1L162 156 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 C6orf229H3BNL8 230 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 FGRP09769 529 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
LINC01235-201ENST00000604724 ENAHQ8N8S7 591 aaPredicted RBP12.64□□□□□ -0.39
LINC01235-201ENST00000604724 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
LINC01235-201ENST00000604724 ATP8A2Q9NTI2 1148 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
LINC01235-201ENST00000604724 CDKL5O76039 1030 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
LINC01235-201ENST00000604724 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 TSPY26PQ9H489 355 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
LINC01235-201ENST00000604724 ZNF654Q8IZM8 581 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
LINC01235-201ENST00000604724 MTA3Q9BTC8 594 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
LINC01235-201ENST00000604724 MKRN1Q9UHC7 482 aaKnown RBP12.63□□□□□ -0.39
LINC01235-201ENST00000604724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01235-201ENST00000604724 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 NMT2O60551 498 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 HMGB2P26583 209 aaKnown RBP12.62□□□□□ -0.39
LINC01235-201ENST00000604724 GUCY1A2P33402 732 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
LINC01235-201ENST00000604724 PDE4CQ08493 712 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 RTN1Q16799 776 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
LINC01235-201ENST00000604724 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 SYNE3Q6ZMZ3 975 aa12.62□□□□□ -0.39
LINC01235-201ENST00000604724 SP8Q8IXZ3 490 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms