RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 ERO1AQ96HE7 468 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 MS4A3Q96HJ5 214 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PRKAG2Q9UGJ0 569 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 KCNH4Q9UQ05 1017 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 KIAA1549LQ6ZVL6 1849 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 ZNFX1Q9P2E3 1918 aaKnown RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 PTPROQ16827 1216 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 METTL16Q86W50 562 aaKnown RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 GLYCTKQ8IVS8 523 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 NKX2-3Q8TAU0 364 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 TMEM134Q9H6X4 195 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 PRKRIP1Q9H875 184 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 GINM1Q9NU53 330 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 MYH1P12882 1939 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 ZBBXA8MT70 800 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 GNAT3A8MTJ3 354 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 HMGB1P1B2RPK0 211 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 IL1R1P14778 569 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 RASA1P20936 1047 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 MTHFSDQ2M296 383 aaKnown RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CRTC2Q53ET0 693 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 MAP3K21Q5TCX8 1036 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 RASIP1Q5U651 963 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 TPTE2Q6XPS3 522 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CDCA7LQ96GN5 454 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CITED4Q96RK1 184 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 BMP2KQ9NSY1 1161 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 TRPC6Q9Y210 931 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 SALL1Q9NSC2 1324 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CHL1O00533 1208 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 PPEF1O14829 653 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 MTHFSP49914 203 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 ANAPC15P60006 121 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 RRS1Q15050 365 aaKnown RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CCDC144BQ3MJ40 725 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 RNF34Q969K3 372 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 COL26A1Q96A83 441 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 MAF1Q9H063 256 aa3.68□□□□□ -1.82
VCAM1-205ENST00000603679 CXXC1Q9P0U4 656 aaPredicted RBP3.68□□□□□ -1.82
VCAM1-205ENST00000603679 hCG_2014768A0A024R1R8 64 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 FKTNO75072 461 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 PEX14O75381 377 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 HSD3B2P26439 372 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 GJA8P48165 433 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 EIF6P56537 245 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 CXCL9Q07325 125 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 DESI1Q6ICB0 168 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 ZNF662Q6ZS27 426 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 ZDHHC16Q969W1 377 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 RBCK1Q9BYM8 510 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 GBA2Q9HCG7 927 aaPredicted RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 CEP350Q5VT06 3117 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 CCER2I3L3R5 266 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 GPR25O00155 361 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 CD44P16070 742 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 PLA2G5P39877 138 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 FAM193AP78312 1265 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 AAMPQ13685 434 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 SPRYD7Q5W111 196 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 ZNF530Q6P9A1 599 aaPredicted RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 APOBEC3FQ8IUX4 373 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 SP7Q8TDD2 431 aaPredicted RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 CCSER2Q9H7U1 834 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 H3BRB1 525 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 PTCD1O75127 700 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 RAB11FIP3O75154 756 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 EIF4A1P60842 406 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 GORABQ5T7V8 394 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 SPACA7Q96KW9 195 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 SETDB2Q96T68 719 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 TUT1Q9H6E5 874 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 PRDM6Q9NQX0 595 aa3.67□□□□□ -1.82
VCAM1-205ENST00000603679 NOP58Q9Y2X3 529 aaKnown RBP3.67□□□□□ -1.82
VCAM1-205ENST00000603679 TPD52L2O43399 206 aaKnown RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 EIF3JO75822 258 aaKnown RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 PAPLNO95428 1278 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 NPR3P17342 541 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 DGKZQ13574 1117 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 EML3Q32P44 896 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 LBX2Q6XYB7 198 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 TRMT44Q8IYL2 757 aaKnown RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 USP6NLQ92738 828 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 PCDHGC3Q9UN70 934 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 CFAP99D6REC4 459 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 NR6A1Q15406 480 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 ECM1Q16610 540 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 CIAPIN1Q6FI81 312 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 ZNF746Q6NUN9 644 aaPredicted RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 PODNQ7Z5L7 613 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 EXOC8Q8IYI6 725 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 SIX5Q8N196 739 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 SEZ6LQ9BYH1 1024 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 GPSM3Q9Y4H4 160 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 PPP1R3GB7ZBB8 358 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 KIF23Q02241 960 aaPredicted RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 C1orf141Q5JVX7 400 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 RNF187Q5TA31 235 aaPredicted RBP3.66□□□□□ -1.82
VCAM1-205ENST00000603679 STRIP1Q5VSL9 837 aa3.66□□□□□ -1.82
VCAM1-205ENST00000603679 TMEM92Q6UXU6 159 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms