RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 INCENPQ9NQS7 918 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 MCM9Q9NXL9 1143 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 SBF1O95248 1867 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 CDK5RAP2Q96SN8 1893 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 FLT1P17948 1338 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 HSCBQ8IWL3 235 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 NKX2-3Q8TAU0 364 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 PRMT6Q96LA8 375 aaPredicted RBP20.73■□□□□ 0.91
DDX49-213ENST00000602113 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 ARPP21Q9UBL0 812 aaPredicted RBP20.73■□□□□ 0.91
DDX49-213ENST00000602113 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
DDX49-213ENST00000602113 SHTN1A0MZ66 631 aa20.72■□□□□ 0.91
DDX49-213ENST00000602113 RPS12P25398 132 aaKnown RBP20.72■□□□□ 0.91
DDX49-213ENST00000602113 OGFOD1Q8N543 542 aa20.72■□□□□ 0.91
DDX49-213ENST00000602113 TCEANC2Q96MN5 208 aa20.72■□□□□ 0.91
DDX49-213ENST00000602113 DDX4Q9NQI0 724 aaKnown RBP20.72■□□□□ 0.91
DDX49-213ENST00000602113 SAP30BPQ9UHR5 308 aaKnown RBP20.72■□□□□ 0.91
DDX49-213ENST00000602113 GJA3Q9Y6H8 435 aa20.72■□□□□ 0.91
DDX49-213ENST00000602113 DICER1Q9UPY3 1922 aaKnown RBP20.72■□□□□ 0.91
DDX49-213ENST00000602113 NEDD4P46934 1319 aa20.71■□□□□ 0.91
DDX49-213ENST00000602113 GMPSP49915 693 aaPredicted RBP20.71■□□□□ 0.91
DDX49-213ENST00000602113 GPR162Q16538 588 aa20.71■□□□□ 0.91
DDX49-213ENST00000602113 AKNAD1Q5T1N1 836 aa20.71■□□□□ 0.91
DDX49-213ENST00000602113 IL27Q8NEV9 243 aa20.71■□□□□ 0.91
DDX49-213ENST00000602113 STAG1Q8WVM7 1258 aa20.71■□□□□ 0.91
DDX49-213ENST00000602113 SPDYE2BA6NHP3 402 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 HMGB1P09429 215 aaKnown RBP20.7■□□□□ 0.91
DDX49-213ENST00000602113 SPDYE6P0CI01 402 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 AK2P54819 239 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 EXOSC10Q01780 885 aaKnown RBP20.7■□□□□ 0.91
DDX49-213ENST00000602113 NFIAQ12857 509 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 SLC4A8Q2Y0W8 1093 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 DDX60LQ5H9U9 1706 aaKnown RBP20.7■□□□□ 0.91
DDX49-213ENST00000602113 C12orf60Q5U649 245 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 DHX32Q7L7V1 743 aaKnown RBP20.7■□□□□ 0.91
DDX49-213ENST00000602113 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.91
DDX49-213ENST00000602113 STK11IPQ8N1F8 1099 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 NAV1Q8NEY1 1877 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 NCOA7Q8NI08 942 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 RNF181Q9P0P0 153 aa20.7■□□□□ 0.91
DDX49-213ENST00000602113 FOCADQ5VW36 1801 aa20.7■□□□□ 0.9
DDX49-213ENST00000602113 CACNB3P54284 484 aa20.7■□□□□ 0.9
DDX49-213ENST00000602113 ZNF280AP59817 542 aaPredicted RBP20.7■□□□□ 0.9
DDX49-213ENST00000602113 PICALMQ13492 652 aa20.7■□□□□ 0.9
DDX49-213ENST00000602113 DLGAP5Q15398 846 aa20.7■□□□□ 0.9
DDX49-213ENST00000602113 MTMR14Q8NCE2 650 aa20.7■□□□□ 0.9
DDX49-213ENST00000602113 TDRD3Q9H7E2 651 aaKnown RBP20.7■□□□□ 0.9
DDX49-213ENST00000602113 K7ELQ4 463 aaPredicted RBP20.69■□□□□ 0.9
DDX49-213ENST00000602113 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
DDX49-213ENST00000602113 DPF2Q92785 391 aa20.69■□□□□ 0.9
DDX49-213ENST00000602113 ZBED3Q96IU2 234 aaPredicted RBP20.69■□□□□ 0.9
DDX49-213ENST00000602113 ALDH8A1Q9H2A2 487 aaPredicted RBP20.69■□□□□ 0.9
DDX49-213ENST00000602113 PLCD1P51178 756 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 NOL8Q76FK4 1167 aaKnown RBP20.68■□□□□ 0.9
DDX49-213ENST00000602113 CHST3Q7LGC8 479 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
DDX49-213ENST00000602113 IDI2Q9BXS1 227 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 LAMB1P07942 1786 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 ECM29Q5VYK3 1845 aa20.68■□□□□ 0.9
DDX49-213ENST00000602113 B4E1Z4 1266 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 FGRP09769 529 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 ANTXR2P58335 489 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 TRDNQ13061 729 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
DDX49-213ENST00000602113 CYB5R4Q7L1T6 521 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 LARP6Q9BRS8 491 aaKnown RBP20.67■□□□□ 0.9
DDX49-213ENST00000602113 LRRC2Q9BYS8 371 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 RNF41Q9H4P4 317 aaPredicted RBP20.67■□□□□ 0.9
DDX49-213ENST00000602113 MYOZ2Q9NPC6 264 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 FAM198AQ9UFP1 575 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 POLR3DP05423 398 aaPredicted RBP20.67■□□□□ 0.9
DDX49-213ENST00000602113 MCM2P49736 904 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 MMP14P50281 582 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 ZFPM1Q8IX07 1006 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 MICALL2Q8IY33 904 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 OSBPL5Q9H0X9 879 aaPredicted RBP20.67■□□□□ 0.9
DDX49-213ENST00000602113 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
DDX49-213ENST00000602113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.67■□□□□ 0.9
DDX49-213ENST00000602113 ROBO3Q96MS0 1386 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 PRC1O43663 620 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 MCM5P33992 734 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 Q6ZUG5 572 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 AMOTL1Q8IY63 956 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 GPC2Q8N158 579 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 DYNLL2Q96FJ2 89 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 KRT23Q9C075 422 aa20.66■□□□□ 0.9
DDX49-213ENST00000602113 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
DDX49-213ENST00000602113 GRIN3BO60391 1043 aa20.65■□□□□ 0.9
DDX49-213ENST00000602113 KDM4AO75164 1064 aa20.65■□□□□ 0.9
DDX49-213ENST00000602113 EGFRP00533 1210 aa20.65■□□□□ 0.9
DDX49-213ENST00000602113 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
DDX49-213ENST00000602113 ZNF70Q9UC06 446 aaPredicted RBP20.65■□□□□ 0.9
DDX49-213ENST00000602113 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
DDX49-213ENST00000602113 UTRNP46939 3433 aa20.65■□□□□ 0.9
DDX49-213ENST00000602113 CLRN2A0PK11 232 aa20.64■□□□□ 0.9
DDX49-213ENST00000602113 NPM3O75607 178 aaKnown RBP20.64■□□□□ 0.9
DDX49-213ENST00000602113 PRDM1O75626 825 aa20.64■□□□□ 0.9
DDX49-213ENST00000602113 NBPF9Q3BBW0 867 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms