RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 DOCK1Q14185 1865 aa20.94■□□□□ 0.94
USE1-208ENST00000600970 CEP290O15078 2479 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 FLT3LGP49771 235 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 RGS3P49796 1198 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 ATP2B3Q16720 1220 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 GADL1Q6ZQY3 521 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 FAM9BQ8IZU0 186 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 IDI2Q9BXS1 227 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 PICK1Q9NRD5 415 aa20.93■□□□□ 0.94
USE1-208ENST00000600970 GNL3LQ9NVN8 582 aaKnown RBP20.93■□□□□ 0.94
USE1-208ENST00000600970 RANBP2P49792 3224 aaKnown RBP20.93■□□□□ 0.94
USE1-208ENST00000600970 ENTPD3O75355 529 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 ELNP15502 786 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 SH3BP5LQ7L8J4 393 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 SIL1Q9H173 461 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 DENND2AQ9ULE3 1009 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 SLC45A1Q9Y2W3 748 aa20.92■□□□□ 0.94
USE1-208ENST00000600970 INHAP05111 366 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 SLURP2P0DP57 97 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 PHKA1P46020 1223 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 MAP3K10Q02779 954 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 RFX7Q2KHR2 1363 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 PXYLP1Q8TE99 480 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 SSH1Q8WYL5 1049 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 CEP126Q9P2H0 1117 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 FBXO3Q9UK99 471 aa20.91■□□□□ 0.94
USE1-208ENST00000600970 GAKO14976 1311 aa20.9■□□□□ 0.94
USE1-208ENST00000600970 SEMA3EO15041 775 aa20.9■□□□□ 0.94
USE1-208ENST00000600970 CIAO1O76071 339 aa20.9■□□□□ 0.94
USE1-208ENST00000600970 IRF5Q13568 498 aa20.9■□□□□ 0.94
USE1-208ENST00000600970 ZSCAN29Q8IWY8 852 aaPredicted RBP20.9■□□□□ 0.94
USE1-208ENST00000600970 LRRFIP2Q9Y608 721 aaKnown RBP20.9■□□□□ 0.94
USE1-208ENST00000600970 ALPK3Q96L96 1907 aa20.9■□□□□ 0.94
USE1-208ENST00000600970 DDTLA6NHG4 134 aaPredicted RBP20.89■□□□□ 0.93
USE1-208ENST00000600970 TNPO2O14787 897 aaKnown RBP20.89■□□□□ 0.93
USE1-208ENST00000600970 EVI5O60447 810 aa20.89■□□□□ 0.93
USE1-208ENST00000600970 TFRCP02786 760 aaKnown RBP20.89■□□□□ 0.93
USE1-208ENST00000600970 DEFB118Q96PH6 123 aa20.89■□□□□ 0.93
USE1-208ENST00000600970 A0A1W2PPC1 479 aa20.88■□□□□ 0.93
USE1-208ENST00000600970 ZBTB22O15209 634 aa20.88■□□□□ 0.93
USE1-208ENST00000600970 CTNND1O60716 968 aaKnown RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 CAPN2P17655 700 aa20.88■□□□□ 0.93
USE1-208ENST00000600970 ZGPATQ8N5A5 531 aaKnown RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 SMCR8Q8TEV9 937 aaPredicted RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 DDX4Q9NQI0 724 aaKnown RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 PAK6Q9NQU5 681 aaPredicted RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.88■□□□□ 0.93
USE1-208ENST00000600970 DOCK3Q8IZD9 2030 aa20.87■□□□□ 0.93
USE1-208ENST00000600970 TRIM75PA6NK02 468 aa20.87■□□□□ 0.93
USE1-208ENST00000600970 CRISPLD2Q9H0B8 497 aa20.87■□□□□ 0.93
USE1-208ENST00000600970 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
USE1-208ENST00000600970 SOX1O00570 391 aaPredicted RBP20.86■□□□□ 0.93
USE1-208ENST00000600970 ADORA1P30542 326 aa20.86■□□□□ 0.93
USE1-208ENST00000600970 PICALMQ13492 652 aa20.86■□□□□ 0.93
USE1-208ENST00000600970 CCDC102BQ68D86 513 aa20.86■□□□□ 0.93
USE1-208ENST00000600970 CCDC84Q86UT8 332 aaPredicted RBP20.86■□□□□ 0.93
USE1-208ENST00000600970 DZIP1Q86YF9 867 aaKnown RBP20.86■□□□□ 0.93
USE1-208ENST00000600970 ANKRD13CQ8N6S4 541 aa20.86■□□□□ 0.93
USE1-208ENST00000600970 FAM163AQ96GL9 167 aaPredicted RBP20.86■□□□□ 0.93
USE1-208ENST00000600970 TAOK2Q9UL54 1235 aa20.86■□□□□ 0.93
USE1-208ENST00000600970 UBTFL1P0CB47 393 aaPredicted RBP20.85■□□□□ 0.93
USE1-208ENST00000600970 IL15P40933 162 aaPredicted RBP20.85■□□□□ 0.93
USE1-208ENST00000600970 BTDP43251 543 aa20.85■□□□□ 0.93
USE1-208ENST00000600970 COA7Q96BR5 231 aa20.85■□□□□ 0.93
USE1-208ENST00000600970 ABCF2Q9UG63 623 aa20.85■□□□□ 0.93
USE1-208ENST00000600970 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
USE1-208ENST00000600970 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
USE1-208ENST00000600970 LOC285556D6RIA3 1793 aa20.85■□□□□ 0.93
USE1-208ENST00000600970 ATAD5Q96QE3 1844 aa20.84■□□□□ 0.93
USE1-208ENST00000600970 TREML2Q5T2D2 321 aa20.84■□□□□ 0.93
USE1-208ENST00000600970 SLF2Q8IX21 1173 aa20.84■□□□□ 0.93
USE1-208ENST00000600970 SLC17A8Q8NDX2 589 aa20.84■□□□□ 0.93
USE1-208ENST00000600970 LRCH3Q96II8 777 aa20.84■□□□□ 0.93
USE1-208ENST00000600970 PAWRQ96IZ0 340 aaKnown RBP20.84■□□□□ 0.93
USE1-208ENST00000600970 MROH7-TTC4A0A0A0MT08 1334 aa20.83■□□□□ 0.93
USE1-208ENST00000600970 E9PSI1 815 aa20.83■□□□□ 0.93
USE1-208ENST00000600970 RASGRF1Q13972 1273 aa20.83■□□□□ 0.93
USE1-208ENST00000600970 FAM110CQ1W6H9 321 aa20.83■□□□□ 0.93
USE1-208ENST00000600970 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
USE1-208ENST00000600970 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.83■□□□□ 0.93
USE1-208ENST00000600970 PDS5AQ29RF7 1337 aaKnown RBP20.82■□□□□ 0.92
USE1-208ENST00000600970 TBC1D12O60347 775 aa20.82■□□□□ 0.92
USE1-208ENST00000600970 RHBDL3P58872 404 aa20.82■□□□□ 0.92
USE1-208ENST00000600970 TIMM10P62072 90 aa20.82■□□□□ 0.92
USE1-208ENST00000600970 NECAB2Q7Z6G3 386 aa20.82■□□□□ 0.92
USE1-208ENST00000600970 PROCA1Q8NCQ7 364 aaPredicted RBP20.82■□□□□ 0.92
USE1-208ENST00000600970 DIS3LQ8TF46 1054 aaKnown RBP20.82■□□□□ 0.92
USE1-208ENST00000600970 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
USE1-208ENST00000600970 FAM196BA6NMK8 535 aa20.81■□□□□ 0.92
USE1-208ENST00000600970 DLL1O00548 723 aa20.81■□□□□ 0.92
USE1-208ENST00000600970 SPTY2D1Q68D10 685 aaPredicted RBP20.81■□□□□ 0.92
USE1-208ENST00000600970 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
USE1-208ENST00000600970 COL6A3P12111 3177 aa20.81■□□□□ 0.92
USE1-208ENST00000600970 GPR75-ASB3A0A0A6YYF3 556 aa20.8■□□□□ 0.92
USE1-208ENST00000600970 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
USE1-208ENST00000600970 ZNF384Q8TF68 577 aa20.8■□□□□ 0.92
USE1-208ENST00000600970 OSBPL5Q9H0X9 879 aaPredicted RBP20.8■□□□□ 0.92
USE1-208ENST00000600970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.8■□□□□ 0.92
USE1-208ENST00000600970 SMC4Q9NTJ3 1288 aa20.8■□□□□ 0.92
USE1-208ENST00000600970 LAMA3Q16787 3333 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms