RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 CUL9Q8IWT3 2517 aa15.43■□□□□ 0.06
HOMER3-211ENST00000599808 A0A1W2PPC1 479 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 EVI5O60447 810 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 INHAP05111 366 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 LDHBP07195 334 aaKnown RBP15.42■□□□□ 0.06
HOMER3-211ENST00000599808 PTPRAP18433 802 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 SCYL3Q8IZE3 742 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 SLC17A8Q8NDX2 589 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
HOMER3-211ENST00000599808 DLL1O00548 723 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 RGS3P49796 1198 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 GADL1Q6ZQY3 521 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 ATG9AQ7Z3C6 839 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
HOMER3-211ENST00000599808 LRCH3Q96II8 777 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 DEFB118Q96PH6 123 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 PICK1Q9NRD5 415 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
HOMER3-211ENST00000599808 TNPO2O14787 897 aaKnown RBP15.4■□□□□ 0.06
HOMER3-211ENST00000599808 TFRCP02786 760 aaKnown RBP15.4■□□□□ 0.06
HOMER3-211ENST00000599808 SLURP2P0DP57 97 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 IRF5Q13568 498 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 SH3BP5LQ7L8J4 393 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 PAK6Q9NQU5 681 aaPredicted RBP15.4■□□□□ 0.06
HOMER3-211ENST00000599808 STAP2Q9UGK3 403 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 SALL1Q9NSC2 1324 aa15.4■□□□□ 0.06
HOMER3-211ENST00000599808 RFX7Q2KHR2 1363 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 ENTPD3O75355 529 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 MAP3K10Q02779 954 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.05
HOMER3-211ENST00000599808 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 CRISPLD2Q9H0B8 497 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
HOMER3-211ENST00000599808 PTPRCP08575 1304 aa15.39■□□□□ 0.05
HOMER3-211ENST00000599808 DDTLA6NHG4 134 aaPredicted RBP15.38■□□□□ 0.05
HOMER3-211ENST00000599808 CAPN2P17655 700 aa15.38■□□□□ 0.05
HOMER3-211ENST00000599808 PHKA1P46020 1223 aa15.38■□□□□ 0.05
HOMER3-211ENST00000599808 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
HOMER3-211ENST00000599808 PAWRQ96IZ0 340 aaKnown RBP15.38■□□□□ 0.05
HOMER3-211ENST00000599808 GNL3LQ9NVN8 582 aaKnown RBP15.38■□□□□ 0.05
HOMER3-211ENST00000599808 LRRFIP2Q9Y608 721 aaKnown RBP15.38■□□□□ 0.05
HOMER3-211ENST00000599808 GAKO14976 1311 aa15.38■□□□□ 0.05
HOMER3-211ENST00000599808 ATAD5Q96QE3 1844 aa15.38■□□□□ 0.05
HOMER3-211ENST00000599808 LOC285556D6RIA3 1793 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 CTNND1O60716 968 aaKnown RBP15.37■□□□□ 0.05
HOMER3-211ENST00000599808 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
HOMER3-211ENST00000599808 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
HOMER3-211ENST00000599808 ANKRD13CQ8N6S4 541 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 DIS3LQ8TF46 1054 aaKnown RBP15.37■□□□□ 0.05
HOMER3-211ENST00000599808 SIL1Q9H173 461 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
HOMER3-211ENST00000599808 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 DENND2AQ9ULE3 1009 aa15.37■□□□□ 0.05
HOMER3-211ENST00000599808 TREML2Q5T2D2 321 aa15.36■□□□□ 0.05
HOMER3-211ENST00000599808 COA7Q96BR5 231 aa15.36■□□□□ 0.05
HOMER3-211ENST00000599808 AGTPBP1Q9UPW5 1226 aa15.36■□□□□ 0.05
HOMER3-211ENST00000599808 PLXNB2O15031 1838 aa15.36■□□□□ 0.05
HOMER3-211ENST00000599808 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
HOMER3-211ENST00000599808 SEMA3EO15041 775 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 CIAO1O76071 339 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 FAM110CQ1W6H9 321 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 GDF15Q99988 308 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.35■□□□□ 0.05
HOMER3-211ENST00000599808 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 ZNF521Q96K83 1311 aa15.35■□□□□ 0.05
HOMER3-211ENST00000599808 ADORA1P30542 326 aa15.34■□□□□ 0.05
HOMER3-211ENST00000599808 PICALMQ13492 652 aa15.34■□□□□ 0.05
HOMER3-211ENST00000599808 DZIP1Q86YF9 867 aaKnown RBP15.34■□□□□ 0.05
HOMER3-211ENST00000599808 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
HOMER3-211ENST00000599808 ZBTB22O15209 634 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 BMP8BP34820 402 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 BTDP43251 543 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 CCDC102BQ68D86 513 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 C7orf61Q8IZ16 206 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 FAM163AQ96GL9 167 aaPredicted RBP15.33■□□□□ 0.04
HOMER3-211ENST00000599808 ABCF2Q9UG63 623 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
HOMER3-211ENST00000599808 ZMYND8Q9ULU4 1186 aaPredicted RBP15.33■□□□□ 0.04
HOMER3-211ENST00000599808 FAM196BA6NMK8 535 aa15.32■□□□□ 0.04
HOMER3-211ENST00000599808 ANP32CO43423 234 aa15.32■□□□□ 0.04
HOMER3-211ENST00000599808 HMGCRP04035 888 aa15.32■□□□□ 0.04
HOMER3-211ENST00000599808 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
HOMER3-211ENST00000599808 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
HOMER3-211ENST00000599808 RASGRF1Q13972 1273 aa15.32■□□□□ 0.04
HOMER3-211ENST00000599808 PROCA1Q8NCQ7 364 aaPredicted RBP15.32■□□□□ 0.04
HOMER3-211ENST00000599808 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
HOMER3-211ENST00000599808 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
HOMER3-211ENST00000599808 TBC1D12O60347 775 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 UBTFL1P0CB47 393 aaPredicted RBP15.31■□□□□ 0.04
HOMER3-211ENST00000599808 RHBDL3P58872 404 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 TRIM32Q13049 653 aa15.31■□□□□ 0.04
HOMER3-211ENST00000599808 SPP2Q13103 211 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms