RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 STRBPQ96SI9 672 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 CREBZFQ9NS37 354 aa19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 DIAPH3Q9NSV4 1193 aa19.89■□□□□ 0.77
SHKBP1-219ENST00000599575 GPAA1O43292 621 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 TCP10Q12799 353 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 PICALMQ13492 652 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 CST9Q5W186 159 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 LCORLQ8N3X6 602 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 RUFY2Q8WXA3 655 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 HHIPL1Q96JK4 782 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 ARMT1Q9H993 441 aa19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 DDX4Q9NQI0 724 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-219ENST00000599575 HSPA6P17066 643 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 MAP3K10Q02779 954 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 MAP3K11Q16584 847 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 NBPF12Q5TAG4 269 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 ARMC9Q7Z3E5 817 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 TTC6Q86TZ1 520 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 GBA2Q9HCG7 927 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 PI4KBQ9UBF8 816 aa19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 MKRN1Q9UHC7 482 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 MYO5AQ9Y4I1 1855 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-219ENST00000599575 RAD50Q92878 1312 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 TBC1D12O60347 775 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 FOXP4Q8IVH2 680 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 MAPKAPK5Q8IW41 473 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 ZSCAN29Q8IWY8 852 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 AMOTL1Q8IY63 956 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 NACAP1Q9BZK3 213 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 DCP1AQ9NPI6 582 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 HERC5Q9UII4 1024 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 SLC4A4Q9Y6R1 1079 aa19.86■□□□□ 0.77
SHKBP1-219ENST00000599575 MYH7P12883 1935 aa19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 PATL2C9JE40 543 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 HLA-DOAP06340 250 aa19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 EHD4Q9H223 541 aa19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 ZNF408Q9H9D4 720 aa19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 SCAF8Q9UPN6 1271 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-219ENST00000599575 CHGBP05060 677 aa19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 IREB2P48200 963 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 SLFNL1Q499Z3 407 aa19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 PRAMEF18Q5VWM3 479 aa19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 ZFPM1Q8IX07 1006 aa19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 TLL2Q9Y6L7 1015 aa19.84■□□□□ 0.77
SHKBP1-219ENST00000599575 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 M0R2C6 588 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 CHMLP26374 656 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 CASC1Q6TDU7 716 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 SH3BP5LQ7L8J4 393 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 SAPCD2Q86UD0 394 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 FAM227BQ96M60 508 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 ZNF341Q9BYN7 854 aa19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 ARPP21Q9UBL0 812 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-219ENST00000599575 CCDC171Q6TFL3 1326 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 A0A0D9SFI3 127 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 GSG1L2A8MUP6 293 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 FMR1Q06787 632 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 SBK1Q52WX2 424 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 CWC27Q6UX04 472 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 DLK2Q6UY11 383 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 SDR42E1Q8WUS8 393 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 SEC62Q99442 399 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 MCM9Q9NXL9 1143 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 PAPPA2Q9BXP8 1791 aa19.82■□□□□ 0.76
SHKBP1-219ENST00000599575 POLR2AP24928 1970 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 POLR3DP05423 398 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 ALX1Q15699 326 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 LDLRAD1Q5T700 205 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 ANKRD13AQ8IZ07 590 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 KLRG1Q96E93 195 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 SERPINB13Q9UIV8 391 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 ZNF112Q9UJU3 913 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 PALD1Q9ULE6 856 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 SSC5DA1L4H1 1573 aa19.81■□□□□ 0.76
SHKBP1-219ENST00000599575 ZMYM6O95789 1325 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 RASSF10A6NK89 507 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 PRKAB2O43741 272 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 USP2O75604 605 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 APPP05067 770 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 HUNKP57058 714 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 CDAN1Q8IWY9 1227 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 TRIM34Q9BYJ4 488 aa19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 ABT1Q9ULW3 272 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 ANGEL1Q9UNK9 670 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-219ENST00000599575 TRPM7Q96QT4 1865 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 C12orf60Q5U649 245 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 IFNL3Q8IZI9 196 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 CRACR2BQ8N4Y2 399 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 GINM1Q9NU53 330 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 SWAP70Q9UH65 585 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
SHKBP1-219ENST00000599575 USP17L12C9JPN9 530 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 USP17L21D6R901 530 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 CDC45O75419 566 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms