RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
VRK3-209ENST00000594948 ENOX1Q8TC92 643 aaKnown RBP15.21■□□□□ 0.03
VRK3-209ENST00000594948 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
VRK3-209ENST00000594948 PPP2R2CQ9Y2T4 447 aa15.21■□□□□ 0.03
VRK3-209ENST00000594948 TOGARAM1Q9Y4F4 1720 aa15.21■□□□□ 0.03
VRK3-209ENST00000594948 LRP5O75197 1615 aa15.21■□□□□ 0.02
VRK3-209ENST00000594948 BCORQ6W2J9 1755 aa15.21■□□□□ 0.02
VRK3-209ENST00000594948 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 PLA2G4AP47712 749 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 ZNF579Q8NAF0 562 aaKnown RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 ZBTB38Q8NAP3 1195 aaPredicted RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 ZCRB1Q8TBF4 217 aaKnown RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 FANCLQ9NW38 375 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 PCDHA5Q9Y5H7 936 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 FMNL1O95466 1100 aaPredicted RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 ZNF18P17022 549 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 CDC27P30260 824 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 MCAMP43121 646 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 MAP3K9P80192 1104 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 RAB11FIP4Q86YS3 637 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 GPR161Q8N6U8 529 aaKnown RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 AIFM3Q96NN9 605 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 BAG1Q99933 345 aaPredicted RBP15.2■□□□□ 0.02
VRK3-209ENST00000594948 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 UBXN6Q9BZV1 441 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 INTS13Q9NVM9 706 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 CALCOCO1Q9P1Z2 691 aa15.2■□□□□ 0.02
VRK3-209ENST00000594948 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 IFNAR1P17181 557 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 CYP2C19P33261 490 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 SARSP49591 514 aaKnown RBP15.19■□□□□ 0.02
VRK3-209ENST00000594948 SSRP1Q08945 709 aaKnown RBP15.19■□□□□ 0.02
VRK3-209ENST00000594948 ISM2Q6H9L7 571 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 KANK3Q6NY19 840 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 FOXP4Q8IVH2 680 aaPredicted RBP15.19■□□□□ 0.02
VRK3-209ENST00000594948 BCL11BQ9C0K0 894 aaPredicted RBP15.19■□□□□ 0.02
VRK3-209ENST00000594948 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
VRK3-209ENST00000594948 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
VRK3-209ENST00000594948 TMEM232C9JQI7 657 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 NPHP1O15259 732 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 UQCRFS1P1P0C7P4 283 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 PTPREP23469 700 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 CASQ1P31415 396 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 SPECC1LQ69YQ0 1117 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 NOSTRINQ8IVI9 506 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 CARD6Q9BX69 1037 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
VRK3-209ENST00000594948 MAN1B1Q9UKM7 699 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 TBC1D2BQ9UPU7 963 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
VRK3-209ENST00000594948 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.18■□□□□ 0.02
VRK3-209ENST00000594948 FANCGO15287 622 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 ATF3P18847 181 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 BMP6P22004 513 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 ARID4AP29374 1257 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 RCAN1P53805 252 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 MORC3Q14149 939 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 POSTNQ15063 836 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 SAFBQ15424 915 aaKnown RBP eCLIP15.17■□□□□ 0.02
VRK3-209ENST00000594948 CHRNA2Q15822 529 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 RILPL1Q5EBL4 403 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 TEX35Q5T0J7 233 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 SLC9C2Q5TAH2 1124 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 JAKMIP3Q5VZ66 844 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 TC2NQ8N9U0 490 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 CLIC6Q96NY7 704 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 FOXP1Q9H334 677 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 CNNM2Q9H8M5 875 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 MRFAP1Q9Y605 127 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 MMP1P03956 469 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 ERCC5P28715 1186 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 PDE4BQ07343 736 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 HSP90AB3PQ58FF7 597 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 KIF6Q6ZMV9 814 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 NUTM2AQ8IVF1 878 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 RABGGTAQ92696 567 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 PHKBQ93100 1093 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 FBXO2Q9UK22 296 aaPredicted RBP15.17■□□□□ 0.02
VRK3-209ENST00000594948 STRCP1A6NGW2 1772 aa15.17■□□□□ 0.02
VRK3-209ENST00000594948 NUP98P52948 1817 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 B4E1Z4 1266 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 TMEM67Q5HYA8 995 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 VGLL2Q8N8G2 317 aa15.16■□□□□ 0.02
VRK3-209ENST00000594948 STRBPQ96SI9 672 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms