RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 EXOSC10Q01780 885 aaKnown RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 Q6ZUG5 572 aa15.62■□□□□ 0.09
VRK3-205ENST00000593919 RALYLQ86SE5 291 aaKnown RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 MB21D2Q8IYB1 491 aaPredicted RBP15.62■□□□□ 0.09
VRK3-205ENST00000593919 CYP2D7A0A087X1C5 515 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 SMIM22K7EJ46 135 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 LARGE1O95461 756 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 USP5P45974 858 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 RHBDL3P58872 404 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 TRDNQ13061 729 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 ANKRD1Q15327 319 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 AKNAD1Q5T1N1 836 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 CTR9Q6PD62 1173 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 CHST3Q7LGC8 479 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
VRK3-205ENST00000593919 INCENPQ9NQS7 918 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 MKRN1Q9UHC7 482 aaKnown RBP15.61■□□□□ 0.09
VRK3-205ENST00000593919 TACC3Q9Y6A5 838 aa15.61■□□□□ 0.09
VRK3-205ENST00000593919 USP17L12C9JPN9 530 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 USP17L21D6R901 530 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 PLCG2P16885 1265 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 CUL4AQ13619 759 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 NKX2-3Q8TAU0 364 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 TGFBRAP1Q8WUH2 860 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 STAG1Q8WVM7 1258 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 ANAPC4Q9UJX5 808 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 TPCN1Q9ULQ1 816 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 B4E1Z4 1266 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 RAD17O75943 681 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 MCM5P33992 734 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 HHIPL2Q6UWX4 724 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 MFSD6Q6ZSS7 791 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 STK11IPQ8N1F8 1099 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 TEKT1Q969V4 418 aa15.6■□□□□ 0.09
VRK3-205ENST00000593919 CWC22Q9HCG8 908 aaKnown RBP15.6■□□□□ 0.09
VRK3-205ENST00000593919 ARPP21Q9UBL0 812 aaPredicted RBP15.6■□□□□ 0.09
VRK3-205ENST00000593919 CRKP46108 304 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 ANTXR2P58335 489 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 NUCB2P80303 420 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 FGD1P98174 961 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 EVX2Q03828 476 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 ME3Q16798 604 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 BRF1Q92994 677 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 AGXT2Q9BYV1 514 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 MCM9Q9NXL9 1143 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 LTBP3Q9NS15 1303 aa15.59■□□□□ 0.09
VRK3-205ENST00000593919 PSMD14O00487 310 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 PRC1O43663 620 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 USP17L8P0C7I0 530 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 RASSF7Q02833 373 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 PKP1Q13835 747 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 MAPKAPK5Q8IW41 473 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 ZSCAN31Q96LW9 406 aaPredicted RBP15.58■□□□□ 0.09
VRK3-205ENST00000593919 CNNM2Q9H8M5 875 aa15.58■□□□□ 0.09
VRK3-205ENST00000593919 SH2B1Q9NRF2 756 aaPredicted RBP15.58■□□□□ 0.09
VRK3-205ENST00000593919 CYP2D6P10635 497 aa15.58■□□□□ 0.08
VRK3-205ENST00000593919 SLC4A8Q2Y0W8 1093 aa15.58■□□□□ 0.08
VRK3-205ENST00000593919 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
VRK3-205ENST00000593919 CYB5R4Q7L1T6 521 aa15.58■□□□□ 0.08
VRK3-205ENST00000593919 RNF41Q9H4P4 317 aaPredicted RBP15.58■□□□□ 0.08
VRK3-205ENST00000593919 BRPF3Q9ULD4 1205 aa15.58■□□□□ 0.08
VRK3-205ENST00000593919 FLT1P17948 1338 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 WDR19Q8NEZ3 1342 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 VIL1P09327 827 aaKnown RBP15.57■□□□□ 0.08
VRK3-205ENST00000593919 HDLBPQ00341 1268 aaKnown RBP15.57■□□□□ 0.08
VRK3-205ENST00000593919 RRP12Q5JTH9 1297 aaKnown RBP15.57■□□□□ 0.08
VRK3-205ENST00000593919 APOBEC3HQ6NTF7 200 aaKnown RBP15.57■□□□□ 0.08
VRK3-205ENST00000593919 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
VRK3-205ENST00000593919 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 MRIQ9BWK5 157 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 KRT23Q9C075 422 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 PCDHAC2Q9Y5I4 1007 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 MYO3BQ8WXR4 1341 aa15.57■□□□□ 0.08
VRK3-205ENST00000593919 KDM4AO75164 1064 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 BAG4O95429 457 aaKnown RBP15.56■□□□□ 0.08
VRK3-205ENST00000593919 PTMSP20962 102 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 FBXL16Q8N461 479 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 JDP2Q8WYK2 163 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 INTS4Q96HW7 963 aaKnown RBP15.56■□□□□ 0.08
VRK3-205ENST00000593919 GPHNQ9NQX3 736 aaPredicted RBP15.56■□□□□ 0.08
VRK3-205ENST00000593919 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 DICER1Q9UPY3 1922 aaKnown RBP15.56■□□□□ 0.08
VRK3-205ENST00000593919 SBF1O95248 1867 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 APOBRQ0VD83 1088 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 ST3GAL1Q11201 340 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 CCDC83Q8IWF9 413 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 ZSWIM5Q9P217 1185 aa15.56■□□□□ 0.08
VRK3-205ENST00000593919 PRELPP51888 382 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 RBM5P52756 815 aaKnown RBP eCLIP15.55■□□□□ 0.08
VRK3-205ENST00000593919 CXCL9Q07325 125 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 C12orf60Q5U649 245 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 CDC42EP5Q6NZY7 148 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 CLEC17AQ6ZS10 378 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
VRK3-205ENST00000593919 GMLQ99445 158 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms