RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 RABL6Q3YEC7 729 aaPredicted RBP11.59□□□□□ -0.55
SRRM1-221ENST00000593639 CCDC184Q52MB2 194 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 FASTKD5Q7L8L6 764 aaKnown RBP11.59□□□□□ -0.55
SRRM1-221ENST00000593639 SCYL3Q8IZE3 742 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.59□□□□□ -0.55
SRRM1-221ENST00000593639 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
SRRM1-221ENST00000593639 EYSQ5T1H1 3165 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SYN1P17600 705 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 PTPRAP18433 802 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 FGFR2P21802 821 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SMCR8Q8TEV9 937 aaPredicted RBP11.58□□□□□ -0.56
SRRM1-221ENST00000593639 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
SRRM1-221ENST00000593639 PICK1Q9NRD5 415 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 SLC45A1Q9Y2W3 748 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 UTYO14607 1347 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 KIF16BQ96L93 1317 aa11.58□□□□□ -0.56
SRRM1-221ENST00000593639 PRDX5P30044 214 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 MAGEA10P43363 369 aaPredicted RBP11.57□□□□□ -0.56
SRRM1-221ENST00000593639 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
SRRM1-221ENST00000593639 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 TDHQ8IZJ6 230 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 ANKRD13CQ8N6S4 541 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 WDR66Q8TBY9 1149 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 USP40Q9NVE5 1235 aa11.57□□□□□ -0.56
SRRM1-221ENST00000593639 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.57□□□□□ -0.56
SRRM1-221ENST00000593639 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
SRRM1-221ENST00000593639 IFIT1P09914 478 aaKnown RBP11.56□□□□□ -0.56
SRRM1-221ENST00000593639 TRIM32Q13049 653 aa11.56□□□□□ -0.56
SRRM1-221ENST00000593639 CCDC84Q86UT8 332 aaPredicted RBP11.56□□□□□ -0.56
SRRM1-221ENST00000593639 ANKLE1Q8NAG6 615 aa11.56□□□□□ -0.56
SRRM1-221ENST00000593639 COA7Q96BR5 231 aa11.56□□□□□ -0.56
SRRM1-221ENST00000593639 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
SRRM1-221ENST00000593639 HMGCRP04035 888 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 ZEB1P37275 1124 aaPredicted RBP11.55□□□□□ -0.56
SRRM1-221ENST00000593639 RGS3P49796 1198 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 MAP3K10Q02779 954 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 FAM110CQ1W6H9 321 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 NCBP3Q53F19 620 aaKnown RBP11.55□□□□□ -0.56
SRRM1-221ENST00000593639 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 AGTPBP1Q9UPW5 1226 aa11.55□□□□□ -0.56
SRRM1-221ENST00000593639 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
SRRM1-221ENST00000593639 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
SRRM1-221ENST00000593639 LPIN2Q92539 896 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
SRRM1-221ENST00000593639 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 GJD2Q9UKL4 321 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 LRRFIP2Q9Y608 721 aaKnown RBP11.54□□□□□ -0.56
SRRM1-221ENST00000593639 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
SRRM1-221ENST00000593639 CDH23Q9H251 3354 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 MUC3AQ02505 3323 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 DDTLA6NHG4 134 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-221ENST00000593639 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
SRRM1-221ENST00000593639 ENTPD3O75355 529 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 LDHBP07195 334 aaKnown RBP11.53□□□□□ -0.56
SRRM1-221ENST00000593639 SLC5A1P13866 664 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 ZSCAN29Q8IWY8 852 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-221ENST00000593639 HMX1Q9NP08 348 aaPredicted RBP11.53□□□□□ -0.56
SRRM1-221ENST00000593639 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 PFASO15067 1338 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 RPTORQ8N122 1335 aa11.53□□□□□ -0.56
SRRM1-221ENST00000593639 EYA2O00167 538 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 RFX5P48382 616 aaPredicted RBP11.52□□□□□ -0.57
SRRM1-221ENST00000593639 TRIB2Q92519 343 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 GUCD1Q96NT3 240 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 DDX4Q9NQI0 724 aaKnown RBP11.52□□□□□ -0.57
SRRM1-221ENST00000593639 PNMA3Q9UL41 463 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 GAKO14976 1311 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 SALL1Q9NSC2 1324 aa11.52□□□□□ -0.57
SRRM1-221ENST00000593639 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
SRRM1-221ENST00000593639 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
SRRM1-221ENST00000593639 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 COL6A1P12109 1028 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 PHKA1P46020 1223 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-221ENST00000593639 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-221ENST00000593639 SPP2Q13103 211 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 PICALMQ13492 652 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
SRRM1-221ENST00000593639 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
SRRM1-221ENST00000593639 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 ALPK3Q96L96 1907 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 PEX10O60683 326 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
SRRM1-221ENST00000593639 CYP2B6P20813 491 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 HMGCS2P54868 508 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 ATP2B3Q16720 1220 aa11.49□□□□□ -0.57
SRRM1-221ENST00000593639 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms