RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, human

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-224	ENST00000593044	EVC	P57679	992 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	LRMP	Q12912	555 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	SLC27A3	Q5K4L6	730 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	MFSD6	Q6ZSS7	791 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	ZNF384	Q8TF68	577 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	RPGR	Q92834	1020 aa	Known RBP	18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	PRIMPOL	Q96LW4	560 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	ZKSCAN3	Q9BRR0	538 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	CBX8	Q9HC52	389 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	NRBP1	Q9UHY1	535 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	GOLGB1	Q14789	3259 aa	Known RBP	18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	PNPLA7	Q6ZV29	1317 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	FDPS	P14324	419 aa	Known RBP	18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	GRAP	Q13588	217 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	OTUD7B	Q6GQQ9	843 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	NFXL1	Q6ZNB6	911 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	GRAPL	Q8TC17	118 aa	Predicted RBP	18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	BICD2	Q8TD16	824 aa		18.82	■□□□□ 0.6
TMC6-224	ENST00000593044	PGBD1	Q96JS3	809 aa		18.81	■□□□□ 0.6
TMC6-224	ENST00000593044	MYL10	Q9BUA6	226 aa		18.81	■□□□□ 0.6
TMC6-224	ENST00000593044	PRDX5	P30044	214 aa		18.81	■□□□□ 0.6
TMC6-224	ENST00000593044	AKNAD1	Q5T1N1	836 aa		18.81	■□□□□ 0.6
TMC6-224	ENST00000593044	MTERF4	Q7Z6M4	381 aa	Known RBP	18.81	■□□□□ 0.6
TMC6-224	ENST00000593044	ADD1	P35611	737 aa	Known RBP	18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	REST	Q13127	1097 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	MICU3	Q86XE3	530 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	KIF3A	Q9Y496	699 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	ELP1	O95163	1332 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	SH2B2	O14492	632 aa	Predicted RBP	18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	TMEM67	Q5HYA8	995 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.8	■□□□□ 0.6	6e-8	■■■■□ 19.6
TMC6-224	ENST00000593044	SALL1	Q9NSC2	1324 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	IFIT3	O14879	490 aa	Known RBP	18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	MECOM	Q03112	1051 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	CCDC186	Q7Z3E2	898 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	DRC7	Q8IY82	874 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	DNAJC25	Q9H1X3	360 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	GJB4	Q9NTQ9	266 aa		18.8	■□□□□ 0.6
TMC6-224	ENST00000593044	UBR3	Q6ZT12	1888 aa		18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	CYP2D7	A0A087X1C5	515 aa		18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	DHX16	O60231	1041 aa	Known RBP	18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	ST5	P78524	1137 aa		18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	RIOK1	Q9BRS2	568 aa	Known RBP	18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	ORC3	Q9UBD5	711 aa	Predicted RBP	18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	IGDCC4	Q8TDY8	1250 aa		18.79	■□□□□ 0.6
TMC6-224	ENST00000593044	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.79	■□□□□ 0.6	1e-6	■■■□□ 15
TMC6-224	ENST00000593044		A0A087WWV3	80 aa		18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	METAP2	P50579	478 aa	Known RBP eCLIP	18.78	■□□□□ 0.6	1e-6	■□□□□ 10.2
TMC6-224	ENST00000593044	NSUN4	Q96CB9	384 aa	Known RBP	18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	RIOK3	O14730	519 aa	Known RBP	18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	PPARA	Q07869	468 aa		18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	DDR1	Q08345	913 aa		18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	WDR19	Q8NEZ3	1342 aa		18.78	■□□□□ 0.6
TMC6-224	ENST00000593044	APOA5	Q6Q788	366 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	TRIM5	Q9C035	493 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	ZMYM6	O95789	1325 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	SEMA3E	O15041	775 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	CHMP4C	Q96CF2	233 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	TMEM87B	Q96K49	555 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	LY9	Q9HBG7	655 aa		18.77	■□□□□ 0.6
TMC6-224	ENST00000593044	APBA3	O96018	575 aa		18.77	■□□□□ 0.59
TMC6-224	ENST00000593044	KRT23	Q9C075	422 aa		18.77	■□□□□ 0.59
TMC6-224	ENST00000593044	CLSTN2	Q9H4D0	955 aa		18.77	■□□□□ 0.59
TMC6-224	ENST00000593044	CNNM2	Q9H8M5	875 aa		18.77	■□□□□ 0.59
TMC6-224	ENST00000593044	GOLGA6L6	A8MZA4	724 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	CDC27	P30260	824 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	CACNA1S	Q13698	1873 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	MYH13	Q9UKX3	1938 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	ZBTB43	O43298	467 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	GPSM2	P81274	684 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	SLC4A8	Q2Y0W8	1093 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	PHKB	Q93100	1093 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	CHD4	Q14839	1912 aa		18.76	■□□□□ 0.59
TMC6-224	ENST00000593044	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.75	■□□□□ 0.59	6e-8	■■■■■ 34.7
TMC6-224	ENST00000593044	RBM6	P78332	1123 aa	Known RBP	18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	DMTN	Q08495	405 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	STAG1	Q8WVM7	1258 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	C8orf76	Q96K31	380 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	AIFM3	Q96NN9	605 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	SLC12A7	Q9Y666	1083 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	XDH	P47989	1333 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	CCDC69	A6NI79	296 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	PRDM1	O75626	825 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	ZNF165	P49910	485 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	C16orf45	Q96MC5	204 aa	Predicted RBP	18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	DDX19A	Q9NUU7	478 aa	Known RBP	18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	EVX2	Q03828	476 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	ZNF827	Q17R98	1081 aa		18.75	■□□□□ 0.59
TMC6-224	ENST00000593044	UFL1	O94874	794 aa		18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	DZIP1	Q86YF9	867 aa	Known RBP	18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	CCDC94	Q9BW85	323 aa	Predicted RBP	18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	LEMD3	Q9Y2U8	911 aa		18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	GOLGA8A	A7E2F4	631 aa		18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	POLRMT	O00411	1230 aa	Known RBP	18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	POLR3D	P05423	398 aa	Predicted RBP	18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	UTP14C	Q5TAP6	766 aa	Known RBP	18.74	■□□□□ 0.59
TMC6-224	ENST00000593044	RBM17	Q96I25	401 aa	Known RBP	18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms