RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 PRDM2Q13029 1718 aa7.09□□□□□ -1.27
SAFB-208ENST00000590485 ABCC8Q09428 1581 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 TOPBP1Q92547 1522 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 PF4P02776 101 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 CTSBP07858 339 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 SELPP16109 830 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 CAMK2GQ13555 558 aaPredicted RBP7.08□□□□□ -1.28
SAFB-208ENST00000590485 SEPT6Q14141 434 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 NUTM2GQ5VZR2 741 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 KIAA1211Q6ZU35 1233 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 AKTIPQ9H8T0 292 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.08□□□□□ -1.28
SAFB-208ENST00000590485 ARAP1Q96P48 1450 aa7.08□□□□□ -1.28
SAFB-208ENST00000590485 F8W735 103 aaPredicted RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 EIF4A3P38919 411 aaKnown RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 FAM160A1Q05DH4 1040 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 EXOSC6Q5RKV6 272 aaKnown RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 FDX2Q6P4F2 183 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 CCDC84Q86UT8 332 aaPredicted RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 TMEM130Q8N3G9 435 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 GPBAR1Q8TDU6 330 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 SPON2Q9BUD6 331 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 TMPRSS13Q9BYE2 586 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 SUPT16HQ9Y5B9 1047 aaKnown RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 PCDHB5Q9Y5E4 795 aa7.07□□□□□ -1.28
SAFB-208ENST00000590485 EIF4G3O43432 1585 aaKnown RBP7.07□□□□□ -1.28
SAFB-208ENST00000590485 MEGF11A6BM72 1044 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 BPNT1O95861 308 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 DLGAP3O95886 979 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 LIG1P18858 919 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 RAD51AP2Q09MP3 1159 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 DOC2BQ14184 412 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 AKAP4Q5JQC9 854 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 AGGF1Q8N302 714 aaeCLIP7.06□□□□□ -1.28
SAFB-208ENST00000590485 GOLM1Q8NBJ4 401 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 JARID2Q92833 1246 aaPredicted RBP7.06□□□□□ -1.28
SAFB-208ENST00000590485 GAL3ST3Q96A11 431 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 CEP41Q9BYV8 373 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 ADAMTS1Q9UHI8 967 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 PCDHA4Q9UN74 947 aa7.06□□□□□ -1.28
SAFB-208ENST00000590485 AQRO60306 1485 aaKnown RBP eCLIP7.05□□□□□ -1.285e-11■■□□□ 12.1
SAFB-208ENST00000590485 CHD1O14646 1710 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 ZNF862O60290 1169 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 AOC2O75106 756 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 GLB1P16278 677 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 RACK1P63244 317 aaKnown RBP7.05□□□□□ -1.28
SAFB-208ENST00000590485 MBTPS1Q14703 1052 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 KIF4BQ2VIQ3 1234 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 SMG8Q8ND04 991 aaKnown RBP7.05□□□□□ -1.28
SAFB-208ENST00000590485 WDR18Q9BV38 432 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 SUGCTQ9HAC7 445 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 CACNA2D2Q9NY47 1150 aa7.05□□□□□ -1.28
SAFB-208ENST00000590485 CCDC88BA6NC98 1476 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 SYNGAP1Q96PV0 1343 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 SART1O43290 800 aaKnown RBP7.04□□□□□ -1.28
SAFB-208ENST00000590485 ID3Q02535 119 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 GNL2Q13823 731 aaKnown RBP7.04□□□□□ -1.28
SAFB-208ENST00000590485 ADGRE1Q14246 886 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 MPRIPQ6WCQ1 1025 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 ZNF296Q8WUU4 475 aaPredicted RBP7.04□□□□□ -1.28
SAFB-208ENST00000590485 ELMO3Q96BJ8 720 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 ACBD3Q9H3P7 528 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 KCNQ5Q9NR82 932 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 AP4E1Q9UPM8 1137 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 INPP5FQ9Y2H2 1132 aa7.04□□□□□ -1.28
SAFB-208ENST00000590485 DNMBPQ6XZF7 1577 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 ALX3O95076 343 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 F13A1P00488 732 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 ADH5P11766 374 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 IREB2P48200 963 aaKnown RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 FBXL19Q6PCT2 694 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 FAM196AQ6ZSG2 479 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 HDXQ7Z353 690 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 GATAD2BQ8WXI9 593 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 WDR89Q96FK6 387 aaPredicted RBP7.03□□□□□ -1.28
SAFB-208ENST00000590485 PICK1Q9NRD5 415 aa7.03□□□□□ -1.28
SAFB-208ENST00000590485 TARBP1Q13395 1621 aaKnown RBP7.02□□□□□ -1.29
SAFB-208ENST00000590485 GARTP22102 1010 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 NOS3P29474 1203 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 PTPN11Q06124 597 aaPredicted RBP7.02□□□□□ -1.29
SAFB-208ENST00000590485 APOBRQ0VD83 1088 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 PAK2Q13177 524 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 WIPI1Q5MNZ9 446 aaPredicted RBP7.02□□□□□ -1.29
SAFB-208ENST00000590485 Q6ZS46 218 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 ATXN3LQ9H3M9 355 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 CAPN10Q9HC96 672 aa7.02□□□□□ -1.29
SAFB-208ENST00000590485 ROBO2Q9HCK4 1378 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms