RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 A0A0G2JLL6 359 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 CXCL11O14625 94 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 ALDH1L1O75891 902 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 SYN1P17600 705 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 FGFR2P21802 821 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 PRDX5P30044 214 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 PRRT2Q7Z6L0 340 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 LAMA2P24043 3122 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-210ENST00000589990 PTPRAP18433 802 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 TRIM32Q13049 653 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 PXYLP1Q8TE99 480 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 MAST3O60307 1309 aa16.09■□□□□ 0.17
PRKCSH-210ENST00000589990 IRF5Q13568 498 aa16.08■□□□□ 0.16
PRKCSH-210ENST00000589990 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
PRKCSH-210ENST00000589990 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
PRKCSH-210ENST00000589990 UTYO14607 1347 aa16.08■□□□□ 0.16
PRKCSH-210ENST00000589990 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-210ENST00000589990 EYSQ5T1H1 3165 aa16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 BMP8BP34820 402 aa16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 SCYL3Q8IZE3 742 aa16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 ANKRD13CQ8N6S4 541 aa16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 MTMR10Q9NXD2 777 aa16.07■□□□□ 0.16
PRKCSH-210ENST00000589990 DOCK1Q14185 1865 aa16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 MAGEA10P43363 369 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 PUM3Q15397 648 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 COL25A1Q9BXS0 654 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
PRKCSH-210ENST00000589990 RGS3P49796 1198 aa16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 SMCR8Q8TEV9 937 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 SPTBN5Q9NRC6 3674 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
PRKCSH-210ENST00000589990 RFX7Q2KHR2 1363 aa16.04■□□□□ 0.16
PRKCSH-210ENST00000589990 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
PRKCSH-210ENST00000589990 DDTLA6NHG4 134 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-210ENST00000589990 IFIT1P09914 478 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-210ENST00000589990 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
PRKCSH-210ENST00000589990 PEX10O60683 326 aa16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 LRIT3Q3SXY7 679 aa16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 GPR153Q6NV75 609 aa16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 SLC45A1Q9Y2W3 748 aa16.03■□□□□ 0.16
PRKCSH-210ENST00000589990 PFASO15067 1338 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 WDR63Q8IWG1 891 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 TDHQ8IZJ6 230 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 COA7Q96BR5 231 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 GJD2Q9UKL4 321 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.16
PRKCSH-210ENST00000589990 DNAH12Q6ZR08 3092 aa16.02■□□□□ 0.15
PRKCSH-210ENST00000589990 HMGCRP04035 888 aa16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 LDHBP07195 334 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 SLC5A1P13866 664 aa16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 MAP3K10Q02779 954 aa16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 LPIN2Q92539 896 aa16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 NBPF3Q9H094 633 aa16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-210ENST00000589990 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 EYA2O00167 538 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 PHKA1P46020 1223 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
PRKCSH-210ENST00000589990 ANKLE1Q8NAG6 615 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 TRIB2Q92519 343 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 IDI2Q9BXS1 227 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 UBE2OQ9C0C9 1292 aaKnown RBP16■□□□□ 0.15
PRKCSH-210ENST00000589990 C11orf49Q9H6J7 331 aa16■□□□□ 0.15
PRKCSH-210ENST00000589990 RPTORQ8N122 1335 aa15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 PRUNE2Q8WUY3 3088 aa15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 ENTPD3O75355 529 aa15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 PICALMQ13492 652 aa15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 RRP1BQ14684 758 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
PRKCSH-210ENST00000589990 GAKO14976 1311 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 ADORA1P30542 326 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 GUCD1Q96NT3 240 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 SIL1Q9H173 461 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 OGDHLQ9ULD0 1010 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 ATAD5Q96QE3 1844 aa15.98■□□□□ 0.15
PRKCSH-210ENST00000589990 SALL1Q9NSC2 1324 aa15.97■□□□□ 0.15
PRKCSH-210ENST00000589990 CAPN2P17655 700 aa15.97■□□□□ 0.15
PRKCSH-210ENST00000589990 HMGCS2P54868 508 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms