RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 SLC4A3P48751 1232 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 SBK1Q52WX2 424 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 HSCBQ8IWL3 235 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 OGFOD1Q8N543 542 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 INCENPQ9NQS7 918 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 TACC3Q9Y6A5 838 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 UTRNP46939 3433 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 ZNF541Q9H0D2 1346 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 FOCADQ5VW36 1801 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 WDHD1O75717 1129 aaPredicted RBP23.28■■□□□ 1.32
PDE4A-206ENST00000589073 PDRG1Q9NUG6 133 aa23.28■■□□□ 1.32
PDE4A-206ENST00000589073 ARPP21Q9UBL0 812 aaPredicted RBP23.28■■□□□ 1.32
PDE4A-206ENST00000589073 FLT1P17948 1338 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 ECM29Q5VYK3 1845 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 CYP2D6P10635 497 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 EVX2Q03828 476 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 GPR162Q16538 588 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 AKNAD1Q5T1N1 836 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 PRMT6Q96LA8 375 aaPredicted RBP23.27■■□□□ 1.32
PDE4A-206ENST00000589073 NAV1Q8NEY1 1877 aa23.27■■□□□ 1.32
PDE4A-206ENST00000589073 HMGB1P09429 215 aaKnown RBP23.26■■□□□ 1.31
PDE4A-206ENST00000589073 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
PDE4A-206ENST00000589073 STAG1Q8WVM7 1258 aa23.26■■□□□ 1.31
PDE4A-206ENST00000589073 GJA3Q9Y6H8 435 aa23.26■■□□□ 1.31
PDE4A-206ENST00000589073 TIAM2Q8IVF5 1701 aa23.26■■□□□ 1.31
PDE4A-206ENST00000589073 DHX32Q7L7V1 743 aaKnown RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 NCOA7Q8NI08 942 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 TCEANC2Q96MN5 208 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 GMPSP49915 693 aaPredicted RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 EXOSC10Q01780 885 aaKnown RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 DLGAP5Q15398 846 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 C12orf60Q5U649 245 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 MFSD6Q6ZSS7 791 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 STK11IPQ8N1F8 1099 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 TDRD3Q9H7E2 651 aaKnown RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 RNF181Q9P0P0 153 aa23.25■■□□□ 1.31
PDE4A-206ENST00000589073 SAP30BPQ9UHR5 308 aaKnown RBP23.25■■□□□ 1.31
PDE4A-206ENST00000589073 LAMB1P07942 1786 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 SHTN1A0MZ66 631 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 SPDYE2BA6NHP3 402 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 SPDYE6P0CI01 402 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 AK2P54819 239 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 TRDNQ13061 729 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 PICALMQ13492 652 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
PDE4A-206ENST00000589073 MTMR14Q8NCE2 650 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 DPF2Q92785 391 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 ALDH8A1Q9H2A2 487 aaPredicted RBP23.24■■□□□ 1.31
PDE4A-206ENST00000589073 NEDD4P46934 1319 aa23.24■■□□□ 1.31
PDE4A-206ENST00000589073 MYH1P12882 1939 aa23.23■■□□□ 1.31
PDE4A-206ENST00000589073 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
PDE4A-206ENST00000589073 MCM2P49736 904 aa23.23■■□□□ 1.31
PDE4A-206ENST00000589073 NFIAQ12857 509 aa23.23■■□□□ 1.31
PDE4A-206ENST00000589073 SLC4A8Q2Y0W8 1093 aa23.23■■□□□ 1.31
PDE4A-206ENST00000589073 RALYLQ86SE5 291 aaKnown RBP23.23■■□□□ 1.31
PDE4A-206ENST00000589073 DAXXQ9UER7 740 aaPredicted RBP23.23■■□□□ 1.31
PDE4A-206ENST00000589073 DDX60LQ5H9U9 1706 aaKnown RBP23.23■■□□□ 1.31
PDE4A-206ENST00000589073 POLR3DP05423 398 aaPredicted RBP23.22■■□□□ 1.31
PDE4A-206ENST00000589073 MMP14P50281 582 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 CACNB3P54284 484 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 ZNF280AP59817 542 aaPredicted RBP23.22■■□□□ 1.31
PDE4A-206ENST00000589073 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 IDI2Q9BXS1 227 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 RNF41Q9H4P4 317 aaPredicted RBP23.22■■□□□ 1.31
PDE4A-206ENST00000589073 B4E1Z4 1266 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 PLCD1P51178 756 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 NOL8Q76FK4 1167 aaKnown RBP23.22■■□□□ 1.31
PDE4A-206ENST00000589073 CHST3Q7LGC8 479 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 AMOTL1Q8IY63 956 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 ZBED3Q96IU2 234 aaPredicted RBP23.22■■□□□ 1.31
PDE4A-206ENST00000589073 CNNM2Q9H8M5 875 aa23.22■■□□□ 1.31
PDE4A-206ENST00000589073 FGRP09769 529 aa23.21■■□□□ 1.31
PDE4A-206ENST00000589073 LARP6Q9BRS8 491 aaKnown RBP23.21■■□□□ 1.31
PDE4A-206ENST00000589073 LRRC2Q9BYS8 371 aa23.21■■□□□ 1.31
PDE4A-206ENST00000589073 KRT23Q9C075 422 aa23.21■■□□□ 1.31
PDE4A-206ENST00000589073 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
PDE4A-206ENST00000589073 CNOT7Q9UIV1 285 aaKnown RBP23.21■■□□□ 1.31
PDE4A-206ENST00000589073 MCM5P33992 734 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 ANTXR2P58335 489 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 TOB2Q14106 344 aaPredicted RBP23.2■■□□□ 1.3
PDE4A-206ENST00000589073 Q6ZUG5 572 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 MICALL2Q8IY33 904 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 GPC2Q8N158 579 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 OSBPL5Q9H0X9 879 aaPredicted RBP23.2■■□□□ 1.3
PDE4A-206ENST00000589073 FAM198AQ9UFP1 575 aa23.2■■□□□ 1.3
PDE4A-206ENST00000589073 GRIN3BO60391 1043 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
PDE4A-206ENST00000589073 SLC3A2P08195 630 aaKnown RBP23.19■■□□□ 1.3
PDE4A-206ENST00000589073 RRP12Q5JTH9 1297 aaKnown RBP23.19■■□□□ 1.3
PDE4A-206ENST00000589073 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 ZFPM1Q8IX07 1006 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 DYNLL2Q96FJ2 89 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 TOMM22Q9NS69 142 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.19■■□□□ 1.3
PDE4A-206ENST00000589073 PRC1O43663 620 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 PCP11498 1178 aaKnown RBP23.19■■□□□ 1.3
PDE4A-206ENST00000589073 ZSWIM5Q9P217 1185 aa23.19■■□□□ 1.3
PDE4A-206ENST00000589073 ZNF70Q9UC06 446 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms