RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 FAM227BQ96M60 508 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 STRBPQ96SI9 672 aaKnown RBP17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 NACAP1Q9BZK3 213 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 ATP8A2Q9NTI2 1148 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 FAM198AQ9UFP1 575 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
SCAMP4-209ENST00000585335 FLT1P17948 1338 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 A0A0D9SFI3 127 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 APPP05067 770 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 CHMLP26374 656 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 SEC62Q99442 399 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 TMEM39BQ9GZU3 492 aa17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 DHX36Q9H2U1 1008 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 DDX4Q9NQI0 724 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 SCAF8Q9UPN6 1271 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 COL2A1P02458 1487 aaPredicted RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
SCAMP4-209ENST00000585335 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
SCAMP4-209ENST00000585335 ITGBL1O95965 494 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-209ENST00000585335 HLA-DOAP06340 250 aa17.47■□□□□ 0.39
SCAMP4-209ENST00000585335 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
SCAMP4-209ENST00000585335 ZNF408Q9H9D4 720 aa17.47■□□□□ 0.39
SCAMP4-209ENST00000585335 TRAF5O00463 557 aa17.46■□□□□ 0.39
SCAMP4-209ENST00000585335 DCAF15Q66K64 600 aa17.46■□□□□ 0.39
SCAMP4-209ENST00000585335 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
SCAMP4-209ENST00000585335 CSRNP1Q96S65 589 aa17.46■□□□□ 0.39
SCAMP4-209ENST00000585335 FOCADQ5VW36 1801 aa17.46■□□□□ 0.39
SCAMP4-209ENST00000585335 ATRNL1Q5VV63 1379 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 PRKAB2O43741 272 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 CELF2O95319 508 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 POLR3DP05423 398 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 TDO2P48775 406 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 TRIM34Q9BYJ4 488 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 DCP1AQ9NPI6 582 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 NAV1Q8NEY1 1877 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 PASKQ96RG2 1323 aa17.45■□□□□ 0.38
SCAMP4-209ENST00000585335 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 PRAMEF18Q5VWM3 479 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 KIAA1211Q6ZU35 1233 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 C2orf69Q8N8R5 385 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 NAPBQ9H115 298 aa17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-209ENST00000585335 FKBP1BP68106 108 aa17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 ZNF589Q86UQ0 364 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 CRACR2BQ8N4Y2 399 aaPredicted RBP17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
SCAMP4-209ENST00000585335 TRPM7Q96QT4 1865 aa17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 DDTLA6NHG4 134 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 SGSM2O43147 1006 aa17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 ESYT1Q9BSJ8 1104 aa17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
SCAMP4-209ENST00000585335 MYH1P12882 1939 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 TMEM88BA6NKF7 163 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 IREB2P48200 963 aaKnown RBP17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 DLK2Q6UY11 383 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 SH3BP5LQ7L8J4 393 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 FOXP4Q8IVH2 680 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 ZNF341Q9BYN7 854 aa17.41■□□□□ 0.38
SCAMP4-209ENST00000585335 USP17L12C9JPN9 530 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 USP17L21D6R901 530 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 HSPD1P10809 573 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 APLP1P51693 650 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 ALX1Q15699 326 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 SBK1Q52WX2 424 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 CDAN1Q8IWY9 1227 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 DSCC1Q9BVC3 393 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 EHD4Q9H223 541 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 SERPINB13Q9UIV8 391 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 ZMYM6O95789 1325 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
SCAMP4-209ENST00000585335 DDX60LQ5H9U9 1706 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 TBC1D12O60347 775 aa17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 C1QTNF8P60827 252 aa17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 PRKG1Q13976 671 aa17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 VPS53Q5VIR6 699 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms