RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 ELP3Q9H9T3 547 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 RAPGEFL1Q9UHV5 662 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 DNAH12Q6ZR08 3092 aa9.3□□□□□ -0.92
NF1-222ENST00000582892 CLRN2A0PK11 232 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 IRS4O14654 1257 aaPredicted RBP9.29□□□□□ -0.92
NF1-222ENST00000582892 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
NF1-222ENST00000582892 CT47B1P0C2W7 299 aaPredicted RBP9.29□□□□□ -0.92
NF1-222ENST00000582892 KLRK1P26718 216 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
NF1-222ENST00000582892 HSP90AB3PQ58FF7 597 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 APOBEC3FQ8IUX4 373 aaKnown RBP9.29□□□□□ -0.92
NF1-222ENST00000582892 NLRP7Q8WX94 980 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 ISCA1Q9BUE6 129 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 MTMR10Q9NXD2 777 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
NF1-222ENST00000582892 MGAMO43451 1857 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 PLIN1O60240 522 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 USP2O75604 605 aaPredicted RBP9.28□□□□□ -0.92
NF1-222ENST00000582892 KCNC4Q03721 635 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.28□□□□□ -0.92
NF1-222ENST00000582892 WWC1Q8IX03 1113 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 TSPYL4Q9UJ04 414 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 STXBP5LQ9Y2K9 1186 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 XDHP47989 1333 aa9.28□□□□□ -0.92
NF1-222ENST00000582892 MYH3P11055 1940 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 CCL15-CCL14A0A0B4J2E2 113 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 CCL5P13501 91 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 LACTBP83111 547 aaPredicted RBP9.27□□□□□ -0.93
NF1-222ENST00000582892 CCL15Q16663 113 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
NF1-222ENST00000582892 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
NF1-222ENST00000582892 COL1A1P02452 1464 aaPredicted RBP9.27□□□□□ -0.93
NF1-222ENST00000582892 MED23Q9ULK4 1368 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 BDP1A6H8Y1 2624 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 ARAP2Q8WZ64 1704 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 A0A1W2PPC1 479 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
NF1-222ENST00000582892 FARP2O94887 1054 aaPredicted RBP9.26□□□□□ -0.93
NF1-222ENST00000582892 CD46P15529 392 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 GCGRP47871 477 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 GJA8P48165 433 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 CCDC146Q8IYE0 955 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 CERS5Q8N5B7 392 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 HTATIP2Q9BUP3 242 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 ZMYND8Q9ULU4 1186 aaPredicted RBP9.26□□□□□ -0.93
NF1-222ENST00000582892 NR2E3Q9Y5X4 410 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 A0A1B0GUL6 1792 aa9.26□□□□□ -0.93
NF1-222ENST00000582892 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
NF1-222ENST00000582892 PDE4DQ08499 809 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 STRIP1Q5VSL9 837 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.25□□□□□ -0.93
NF1-222ENST00000582892 U2AF1L4Q8WU68 220 aaKnown RBP9.25□□□□□ -0.93
NF1-222ENST00000582892 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 GDF15Q99988 308 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 MYH16Q9H6N6 1097 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 VEZTQ9HBM0 779 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 ZFYVE28Q9HCC9 887 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 PRDM6Q9NQX0 595 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 DOCK3Q8IZD9 2030 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 IL16Q14005 1332 aa9.25□□□□□ -0.93
NF1-222ENST00000582892 F8W031 263 aaPredicted RBP9.24□□□□□ -0.93
NF1-222ENST00000582892 NR1I2O75469 434 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 GJB1P08034 283 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 ATP2B4P23634 1241 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 IREB2P48200 963 aaKnown RBP9.24□□□□□ -0.93
NF1-222ENST00000582892 USP46P62068 366 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 GTF2IP78347 998 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 NFE2L2Q16236 605 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 PLBD2Q8NHP8 589 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 DIS3LQ8TF46 1054 aaKnown RBP9.24□□□□□ -0.93
NF1-222ENST00000582892 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 PNNQ9H307 717 aaKnown RBP9.24□□□□□ -0.93
NF1-222ENST00000582892 ZNF804BA4D1E1 1349 aa9.24□□□□□ -0.93
NF1-222ENST00000582892 BTBD19C9JJ37 291 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 SNAP23O00161 211 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 SYN1P17600 705 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 GRK4P32298 578 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 CCT4P50991 539 aaKnown RBP9.23□□□□□ -0.93
NF1-222ENST00000582892 VGLL4Q14135 290 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 RASA3Q14644 834 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 DLGAP5Q15398 846 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 PRMT6Q96LA8 375 aaPredicted RBP9.23□□□□□ -0.93
NF1-222ENST00000582892 FAM161BQ96MY7 647 aa9.23□□□□□ -0.93
NF1-222ENST00000582892 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms