RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 ADORA1P30542 326 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 MPNDQ8N594 471 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 RMND1Q9NWS8 449 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 SH2B2O14492 632 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 SLC26A4O43511 780 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 POLD1P28340 1107 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 STYK1Q6J9G0 422 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 RCSD1Q6JBY9 416 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 FERMT2Q96AC1 680 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 KIF20AO95235 890 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 IFNAR1P17181 557 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 CCDC125Q86Z20 511 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 OSBP2Q969R2 916 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 RASGRF1Q13972 1273 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 HSP90AA2PQ14568 343 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
TRAPPC8-211ENST00000582539 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 KRT2P35908 639 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 VGLL2Q8N8G2 317 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 DHX36Q9H2U1 1008 aaKnown RBP11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 M0R2C6 588 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 TSPY3P0CV98 308 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 TSPY8P0CW00 308 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 APOBRQ0VD83 1088 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 RASSF8Q8NHQ8 419 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 NUP133Q8WUM0 1156 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 LAD1O00515 517 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 FILIP1LQ4L180 1135 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 FAM200AQ8TCP9 573 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 RTEL1Q9NZ71 1219 aa11.66□□□□□ -0.54
TRAPPC8-211ENST00000582539 MYH3P11055 1940 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 MARCH6O60337 910 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 PPP6R2O75170 966 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 GSDMDP57764 484 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 PPP4CP60510 307 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 SPTLC2O15270 562 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 AMPD3Q01432 767 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 C6orf50Q9HD87 102 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 RREB1Q92766 1687 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 FMNL1O95466 1100 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 APBA3O96018 575 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 TNNI2P48788 182 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 TMEM266Q2M3C6 531 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 TBC1D9BQ66K14 1250 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 ELOA2Q8IYF1 753 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 ZSCAN10Q96SZ4 725 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 CLSTN2Q9H4D0 955 aa11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 MORC2Q9Y6X9 1032 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-211ENST00000582539 TRIM75PA6NK02 468 aa11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 PODNQ7Z5L7 613 aa11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 TEX11Q8IYF3 940 aa11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 NSUN7Q8NE18 718 aaKnown RBP11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 LAMB2P55268 1798 aa11.65□□□□□ -0.55
TRAPPC8-211ENST00000582539 FSD2A1L4K1 749 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 RTKN2Q8IZC4 609 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 PIH1D3Q9NQM4 214 aaKnown RBP11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 GINM1Q9NU53 330 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 KDM4AO75164 1064 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 ADALQ6DHV7 355 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 CRACR2BQ8N4Y2 399 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 SLC26A6Q9BXS9 759 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 TJP1Q07157 1748 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 SHANK3Q9BYB0 1731 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 HSPA1LP34931 641 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 HAND2P61296 217 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 DDX11Q96FC9 970 aa11.64□□□□□ -0.55
TRAPPC8-211ENST00000582539 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms