RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 ADAMTS3O15072 1205 aa12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 KINO60870 393 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CYP2D6P10635 497 aa12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 NTRK3Q16288 839 aa12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CICQ96RK0 1608 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-225ENST00000582482 BTBD18B2RXH4 712 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 SPTLC2O15270 562 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 TTF1Q15361 905 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ZNF396Q96N95 335 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PFKFB1P16118 471 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 FILIP1Q7Z7B0 1213 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MRPS27Q92552 414 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
CDK5RAP3-225ENST00000582482 LRP5O75197 1615 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 USP27XA6NNY8 438 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 WNT7AO00755 349 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GOLGA8FQ08AF8 430 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GOLGA8DPQ0D2H9 430 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GNL2Q13823 731 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CLIP2Q9UDT6 1046 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ATRNO75882 1429 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GNPATO15228 680 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PNOCQ13519 176 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 AXDND1Q5T1B0 1012 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 AKNAD1Q5T1N1 836 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MFSD6Q6ZSS7 791 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PLA2G4DQ86XP0 818 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MINPP1Q9UNW1 487 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
CDK5RAP3-225ENST00000582482 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PRDX5P30044 214 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 GRIK5Q16478 980 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 FAM47AQ5JRC9 791 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 C16orf45Q96MC5 204 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CHD4Q14839 1912 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MYH2Q9UKX2 1941 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CCDC69A6NI79 296 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 SYNE3Q6ZMZ3 975 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 USP49Q70CQ1 688 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 RASGRP2Q7LDG7 609 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ZNF202O95125 648 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CASP1P29466 404 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PPARAQ07869 468 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ZNF827Q17R98 1081 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-225ENST00000582482 COBLO75128 1261 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PLEKHA8P1O95397 391 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 TOB1P50616 345 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 STX1AQ16623 288 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 PDILTQ8N807 584 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 CASZ1Q86V15 1759 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
CDK5RAP3-225ENST00000582482 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 BECN2A8MW95 431 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 WTAPQ15007 396 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ADALQ6DHV7 355 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 MAP3K14Q99558 947 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TRMT1Q9NXH9 659 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 TNKSO95271 1327 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DOCK2Q92608 1830 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 ARAP2Q8WZ64 1704 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 DHX16O60231 1041 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LMOD1P29536 600 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 PTPAQ15257 358 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 AHDC1Q5TGY3 1603 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-225ENST00000582482 NPHP1O15259 732 aa12.38□□□□□ -0.43
CDK5RAP3-225ENST00000582482 RTN1Q16799 776 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms