RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 PLS1Q14651 629 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 TMEM87BQ96K49 555 aa16.25■□□□□ 0.19
CSNK1D-217ENST00000581241 GMNNO75496 209 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 RFC4P35249 363 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 SARNPP82979 210 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 DPH6Q7L8W6 267 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 INF2Q27J81 1249 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.24■□□□□ 0.199e-9■■□□□ 12
CSNK1D-217ENST00000581241 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 FAM212AQ96EL1 285 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 KIF3CO14782 793 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 ZNF131P52739 623 aa16.24■□□□□ 0.19
CSNK1D-217ENST00000581241 PLCG2P16885 1265 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 MCM9Q9NXL9 1143 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 VCXQ9H320 206 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 CASQ2O14958 399 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 CCDC62Q6P9F0 684 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 ZNF202O95125 648 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 WDR44Q5JSH3 913 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 ARHGAP24Q8N264 748 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 BCL2L12Q9HB09 334 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 E7EVH7 732 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 SLC39A6Q13433 755 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 BRD3Q15059 726 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 CSGALNACT2Q8N6G5 542 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 ZCRB1Q8TBF4 217 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
CSNK1D-217ENST00000581241 FANCAO15360 1455 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 GAS8O95995 478 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 SYCE1Q8N0S2 351 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 RNASE9P60153 205 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 LIN9Q5TKA1 542 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 SNX16P57768 344 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 MTX1Q13505 466 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 GOLGA8KD6RF30 607 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 POSTNQ15063 836 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 LETM2Q2VYF4 491 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 SLC9C1Q4G0N8 1177 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 CFAP221Q4G0U5 840 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 FCHSD1Q86WN1 690 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 TCHPQ9BT92 498 aa16.22■□□□□ 0.19
CSNK1D-217ENST00000581241 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 CABS1Q96KC9 395 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 CCNT1O60563 726 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 PIK3AP1Q6ZUJ8 805 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 RABEP2Q9H5N1 569 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 PPFIA4O75335 1185 aa16.21■□□□□ 0.19
CSNK1D-217ENST00000581241 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 LONRF3Q496Y0 759 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 ZNF365Q70YC5 407 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 SETDB2Q96T68 719 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 NYXQ9GZU5 481 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 POLKQ9UBT6 870 aa16.21■□□□□ 0.18
CSNK1D-217ENST00000581241 FLT4P35916 1363 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 MBD4O95243 580 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 HHATQ5VTY9 493 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 KLHL7Q8IXQ5 586 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 NELFBQ8WX92 580 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 ITIH3Q06033 890 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 CDC37L1Q7L3B6 337 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 VSIG1Q86XK7 387 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 ZNF622Q969S3 477 aaKnown RBP eCLIP16.2■□□□□ 0.189e-8■□□□□ 10
CSNK1D-217ENST00000581241 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 RIMS2Q9UQ26 1411 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 CRCPO75575 148 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 SND1Q7KZF4 910 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 RNF10Q8N5U6 811 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 RPGRIP1Q96KN7 1286 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 TAB2Q9NYJ8 693 aa16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-217ENST00000581241 B4E1Z4 1266 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 RAB3IPQ96QF0 476 aaPredicted RBP16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 NCBP1Q09161 790 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 TTC38Q5R3I4 469 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 CCT6BQ92526 530 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 CCDC51Q96ER9 411 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 ZBTB21Q9ULJ3 1066 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 CEP104O60308 925 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 HSPA1LP34931 641 aa16.19■□□□□ 0.18
CSNK1D-217ENST00000581241 ATP6V1AP38606 617 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms