RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ZFPM1Q8IX07 1006 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 TGFBRAP1Q8WUH2 860 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
MKS1-210ENST00000581180 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
MKS1-210ENST00000581180 COL2A1P02458 1487 aaPredicted RBP18.16■□□□□ 0.5
MKS1-210ENST00000581180 CHMLP26374 656 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 TCP10Q12799 353 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 CRNKL1Q9BZJ0 848 aaKnown RBP18.16■□□□□ 0.5
MKS1-210ENST00000581180 TMEM39BQ9GZU3 492 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 DIAPH3Q9NSV4 1193 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 FLT1P17948 1338 aa18.16■□□□□ 0.5
MKS1-210ENST00000581180 PRKAB2O43741 272 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 PICALMQ13492 652 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 PRAMEF18Q5VWM3 479 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 CCDC129Q6ZRS4 1044 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 MAPKAPK5Q8IW41 473 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 CDAN1Q8IWY9 1227 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 OSBPL5Q9H0X9 879 aaPredicted RBP18.15■□□□□ 0.5
MKS1-210ENST00000581180 ATRNL1Q5VV63 1379 aa18.15■□□□□ 0.5
MKS1-210ENST00000581180 SSC5DA1L4H1 1573 aa18.14■□□□□ 0.49
MKS1-210ENST00000581180 NBPF12Q5TAG4 269 aaPredicted RBP18.14■□□□□ 0.49
MKS1-210ENST00000581180 CWC27Q6UX04 472 aaKnown RBP18.14■□□□□ 0.49
MKS1-210ENST00000581180 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
MKS1-210ENST00000581180 SDR42E1Q8WUS8 393 aa18.14■□□□□ 0.49
MKS1-210ENST00000581180 DDTLA6NHG4 134 aaPredicted RBP18.13■□□□□ 0.49
MKS1-210ENST00000581180 GSG1L2A8MUP6 293 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 GNAT2P19087 354 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 USP5P45974 858 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 IL25Q9H293 177 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 DCP1AQ9NPI6 582 aaPredicted RBP18.13■□□□□ 0.49
MKS1-210ENST00000581180 ATP8A2Q9NTI2 1148 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 SLC4A4Q9Y6R1 1079 aa18.13■□□□□ 0.49
MKS1-210ENST00000581180 LAMB1P07942 1786 aa18.12■□□□□ 0.49
MKS1-210ENST00000581180 FOXP2O15409 715 aa18.12■□□□□ 0.49
MKS1-210ENST00000581180 CCDC171Q6TFL3 1326 aa18.12■□□□□ 0.49
MKS1-210ENST00000581180 MYH8P13535 1937 aa18.11■□□□□ 0.49
MKS1-210ENST00000581180 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
MKS1-210ENST00000581180 CST9Q5W186 159 aa18.11■□□□□ 0.49
MKS1-210ENST00000581180 GIMAP6Q6P9H5 292 aa18.11■□□□□ 0.49
MKS1-210ENST00000581180 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
MKS1-210ENST00000581180 RAD50Q92878 1312 aa18.11■□□□□ 0.49
MKS1-210ENST00000581180 PAPPA2Q9BXP8 1791 aa18.11■□□□□ 0.49
MKS1-210ENST00000581180 OTOFQ9HC10 1997 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 CDC45O75419 566 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 CELF2O95319 508 aaKnown RBP18.1■□□□□ 0.49
MKS1-210ENST00000581180 SUPT20HL1Q3ZLR7 823 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 VPS53Q5VIR6 699 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 RUFY2Q8WXA3 655 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 DHX36Q9H2U1 1008 aaKnown RBP18.1■□□□□ 0.49
MKS1-210ENST00000581180 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
MKS1-210ENST00000581180 SGSM2O43147 1006 aa18.09■□□□□ 0.49
MKS1-210ENST00000581180 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
MKS1-210ENST00000581180 MAP3K10Q02779 954 aa18.09■□□□□ 0.49
MKS1-210ENST00000581180 ZSCAN29Q8IWY8 852 aaPredicted RBP18.09■□□□□ 0.49
MKS1-210ENST00000581180 IFNL3Q8IZI9 196 aa18.09■□□□□ 0.49
MKS1-210ENST00000581180 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
MKS1-210ENST00000581180 MCM9Q9NXL9 1143 aa18.09■□□□□ 0.49
MKS1-210ENST00000581180 SAP30BPQ9UHR5 308 aaKnown RBP18.09■□□□□ 0.49
MKS1-210ENST00000581180 LAMA4Q16363 1823 aa18.08■□□□□ 0.48
MKS1-210ENST00000581180 NF2P35240 595 aa18.08■□□□□ 0.48
MKS1-210ENST00000581180 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
MKS1-210ENST00000581180 METTL16Q86W50 562 aaKnown RBP18.08■□□□□ 0.48
MKS1-210ENST00000581180 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.48
MKS1-210ENST00000581180 ZNF408Q9H9D4 720 aa18.08■□□□□ 0.48
MKS1-210ENST00000581180 TBC1D12O60347 775 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 SLURP2P0DP57 97 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 PLCD1P51178 756 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 C1QTNF8P60827 252 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 EVX2Q03828 476 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 ALX1Q15699 326 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 MAP3K11Q16584 847 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 SBK1Q52WX2 424 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 HOOK2Q96ED9 719 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 GBA2Q9HCG7 927 aaPredicted RBP18.07■□□□□ 0.48
MKS1-210ENST00000581180 PI4KBQ9UBF8 816 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 ATAD5Q96QE3 1844 aa18.07■□□□□ 0.48
MKS1-210ENST00000581180 USP17L12C9JPN9 530 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 USP17L21D6R901 530 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 USP2O75604 605 aaPredicted RBP18.06■□□□□ 0.48
MKS1-210ENST00000581180 APPP05067 770 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 CYP2D6P10635 497 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 APLP1P51693 650 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 FKBP1BP68106 108 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 NACAP1Q9BZK3 213 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 EHD4Q9H223 541 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
MKS1-210ENST00000581180 ZMYM6O95789 1325 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 CYP2D7A0A087X1C5 515 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 TMEM88BA6NKF7 163 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
MKS1-210ENST00000581180 POLR3DP05423 398 aaPredicted RBP18.05■□□□□ 0.48
MKS1-210ENST00000581180 HLA-DOAP06340 250 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms