RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 IRF5Q13568 498 aa24.21■■□□□ 1.47
LIMD2-209ENST00000580222 GPR153Q6NV75 609 aa24.21■■□□□ 1.47
LIMD2-209ENST00000580222 A0A0G2JLL6 359 aaPredicted RBP24.2■■□□□ 1.46
LIMD2-209ENST00000580222 SYN1P17600 705 aa24.2■■□□□ 1.46
LIMD2-209ENST00000580222 DIXDC1Q155Q3 683 aa24.2■■□□□ 1.46
LIMD2-209ENST00000580222 CAVIN4Q5BKX8 364 aa24.2■■□□□ 1.46
LIMD2-209ENST00000580222 PRRT2Q7Z6L0 340 aaPredicted RBP24.2■■□□□ 1.46
LIMD2-209ENST00000580222 DAGLAQ9Y4D2 1042 aa24.2■■□□□ 1.46
LIMD2-209ENST00000580222 ZHX2Q9Y6X8 837 aa24.2■■□□□ 1.46
LIMD2-209ENST00000580222 LAMA2P24043 3122 aaKnown RBP24.19■■□□□ 1.46
LIMD2-209ENST00000580222 TNPO2O14787 897 aaKnown RBP24.19■■□□□ 1.46
LIMD2-209ENST00000580222 NBPF7P0C2Y1 421 aaPredicted RBP24.19■■□□□ 1.46
LIMD2-209ENST00000580222 ALDH1L2Q3SY69 923 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 METTL24Q5JXM2 366 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 NECAB2Q7Z6G3 386 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 SMC4Q9NTJ3 1288 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 TAOK2Q9UL54 1235 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 SUGT1Q9Y2Z0 365 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 CACNA1FO60840 1977 aa24.19■■□□□ 1.46
LIMD2-209ENST00000580222 ATRNL1Q5VV63 1379 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 PDE8BO95263 885 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 LRIT3Q3SXY7 679 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 KLHDC4Q8TBB5 520 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 SSH1Q8WYL5 1049 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 AFG3L2Q9Y4W6 797 aa24.18■■□□□ 1.46
LIMD2-209ENST00000580222 PTPRAP18433 802 aa24.17■■□□□ 1.46
LIMD2-209ENST00000580222 MAGEA10P43363 369 aaPredicted RBP24.17■■□□□ 1.46
LIMD2-209ENST00000580222 GADL1Q6ZQY3 521 aa24.17■■□□□ 1.46
LIMD2-209ENST00000580222 ANKRD44Q8N8A2 993 aa24.17■■□□□ 1.46
LIMD2-209ENST00000580222 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.17■■□□□ 1.46
LIMD2-209ENST00000580222 BICC1Q9H694 974 aaKnown RBP24.17■■□□□ 1.46
LIMD2-209ENST00000580222 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.17■■□□□ 1.46
LIMD2-209ENST00000580222 ALPK3Q96L96 1907 aa24.17■■□□□ 1.46
LIMD2-209ENST00000580222 MAST3O60307 1309 aa24.16■■□□□ 1.46
LIMD2-209ENST00000580222 FGFR2P21802 821 aa24.16■■□□□ 1.46
LIMD2-209ENST00000580222 RARSP54136 660 aaKnown RBP24.16■■□□□ 1.46
LIMD2-209ENST00000580222 TRIM32Q13049 653 aa24.16■■□□□ 1.46
LIMD2-209ENST00000580222 SPTBN5Q9NRC6 3674 aaKnown RBP24.15■■□□□ 1.46
LIMD2-209ENST00000580222 ALDH1L1O75891 902 aa24.15■■□□□ 1.46
LIMD2-209ENST00000580222 SLC4A10Q6U841 1118 aa24.15■■□□□ 1.46
LIMD2-209ENST00000580222 SH3BP5LQ7L8J4 393 aa24.15■■□□□ 1.46
LIMD2-209ENST00000580222 FASTKD5Q7L8L6 764 aaKnown RBP24.15■■□□□ 1.46
LIMD2-209ENST00000580222 CCDC84Q86UT8 332 aaPredicted RBP24.15■■□□□ 1.46
LIMD2-209ENST00000580222 MRPL50Q8N5N7 158 aaKnown RBP24.15■■□□□ 1.46
LIMD2-209ENST00000580222 RABL6Q3YEC7 729 aaPredicted RBP24.14■■□□□ 1.45
LIMD2-209ENST00000580222 SCYL3Q8IZE3 742 aa24.14■■□□□ 1.45
LIMD2-209ENST00000580222 ANKRD13CQ8N6S4 541 aa24.14■■□□□ 1.45
LIMD2-209ENST00000580222 USP40Q9NVE5 1235 aa24.14■■□□□ 1.45
LIMD2-209ENST00000580222 CAPN2P17655 700 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 PRDX5P30044 214 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 TDHQ8IZJ6 230 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 SRCIN1Q9C0H9 1055 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 SLC45A1Q9Y2W3 748 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 EYSQ5T1H1 3165 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 MGAMO43451 1857 aa24.13■■□□□ 1.45
LIMD2-209ENST00000580222 UTYO14607 1347 aa24.11■■□□□ 1.45
LIMD2-209ENST00000580222 TREML2Q5T2D2 321 aa24.11■■□□□ 1.45
LIMD2-209ENST00000580222 SMCR8Q8TEV9 937 aaPredicted RBP24.11■■□□□ 1.45
LIMD2-209ENST00000580222 PICK1Q9NRD5 415 aa24.11■■□□□ 1.45
LIMD2-209ENST00000580222 RCAN3Q9UKA8 241 aa24.11■■□□□ 1.45
LIMD2-209ENST00000580222 KIF16BQ96L93 1317 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 TRIM75PA6NK02 468 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 ANKLE1Q8NAG6 615 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 WDR66Q8TBY9 1149 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 COA7Q96BR5 231 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 NBPF3Q9H094 633 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 GJD2Q9UKL4 321 aa24.1■■□□□ 1.45
LIMD2-209ENST00000580222 BCAR3O75815 825 aa24.09■■□□□ 1.45
LIMD2-209ENST00000580222 RGS3P49796 1198 aa24.09■■□□□ 1.45
LIMD2-209ENST00000580222 MAP3K10Q02779 954 aa24.09■■□□□ 1.45
LIMD2-209ENST00000580222 UBE2OQ9C0C9 1292 aaKnown RBP24.09■■□□□ 1.45
LIMD2-209ENST00000580222 IFIT1P09914 478 aaKnown RBP24.08■■□□□ 1.45
LIMD2-209ENST00000580222 PUM3Q15397 648 aaKnown RBP24.08■■□□□ 1.45
LIMD2-209ENST00000580222 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.08■■□□□ 1.45
LIMD2-209ENST00000580222 C11orf49Q9H6J7 331 aa24.08■■□□□ 1.45
LIMD2-209ENST00000580222 PFASO15067 1338 aa24.08■■□□□ 1.44
LIMD2-209ENST00000580222 DDTLA6NHG4 134 aaPredicted RBP24.07■■□□□ 1.44
LIMD2-209ENST00000580222 HMGCRP04035 888 aa24.07■■□□□ 1.44
LIMD2-209ENST00000580222 GUCD1Q96NT3 240 aa24.07■■□□□ 1.44
LIMD2-209ENST00000580222 AGTPBP1Q9UPW5 1226 aa24.07■■□□□ 1.44
LIMD2-209ENST00000580222 PTPRCP08575 1304 aa24.07■■□□□ 1.44
LIMD2-209ENST00000580222 DDX4Q9NQI0 724 aaKnown RBP24.06■■□□□ 1.44
LIMD2-209ENST00000580222 OGDHLQ9ULD0 1010 aa24.06■■□□□ 1.44
LIMD2-209ENST00000580222 RPTORQ8N122 1335 aa24.06■■□□□ 1.44
LIMD2-209ENST00000580222 FAM110CQ1W6H9 321 aa24.05■■□□□ 1.44
LIMD2-209ENST00000580222 FRAT1Q92837 279 aaPredicted RBP24.05■■□□□ 1.44
LIMD2-209ENST00000580222 IDI2Q9BXS1 227 aa24.05■■□□□ 1.44
LIMD2-209ENST00000580222 HMX1Q9NP08 348 aaPredicted RBP24.05■■□□□ 1.44
LIMD2-209ENST00000580222 NOB1Q9ULX3 412 aaKnown RBP24.05■■□□□ 1.44
LIMD2-209ENST00000580222 PRUNE2Q8WUY3 3088 aa24.04■■□□□ 1.44
LIMD2-209ENST00000580222 POTEB2H3BUK9 544 aa24.04■■□□□ 1.44
LIMD2-209ENST00000580222 TRIB2Q92519 343 aa24.04■■□□□ 1.44
LIMD2-209ENST00000580222 LRRFIP2Q9Y608 721 aaKnown RBP24.04■■□□□ 1.44
LIMD2-209ENST00000580222 RFX7Q2KHR2 1363 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 DOCK3Q8IZD9 2030 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 PEX10O60683 326 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 CTNND1O60716 968 aaKnown RBP24.03■■□□□ 1.44
LIMD2-209ENST00000580222 ENTPD3O75355 529 aa24.03■■□□□ 1.44
LIMD2-209ENST00000580222 LDHBP07195 334 aaKnown RBP24.03■■□□□ 1.44
LIMD2-209ENST00000580222 RFX5P48382 616 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms