RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 B4E1Z4 1266 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 KCNQ3O43525 872 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 MYCLP12524 364 aaPredicted RBP11.57□□□□□ -0.56
MSI2-209ENST00000579483 BTDP43251 543 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 TFAP4Q01664 338 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 SP4Q02446 784 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 USP17L1Q7RTZ2 530 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 ATP8A2Q9NTI2 1148 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 KCTD2Q14681 263 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 TMX3Q96JJ7 454 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 SPAG5Q96R06 1193 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 ERLIN1O75477 346 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
MSI2-209ENST00000579483 GYG1P46976 350 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 NUP88Q99567 741 aaPredicted RBP11.57□□□□□ -0.56
MSI2-209ENST00000579483 DSCC1Q9BVC3 393 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 COPRSQ9NQ92 184 aa11.57□□□□□ -0.56
MSI2-209ENST00000579483 RFX1P22670 979 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 ACTN2P35609 894 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 CAMK4Q16566 473 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 KLHDC4Q8TBB5 520 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 PRKAG2Q9UGJ0 569 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 C1orf167Q5SNV9 1468 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 CARMIL3Q8ND23 1372 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 UBE2HP62256 183 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 IQGAP3Q86VI3 1631 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 PABPN1LA6NDY0 278 aaKnown RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 ICA1Q05084 483 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 STRN3Q13033 797 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 TRIM6Q9C030 488 aaPredicted RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 ZEB2O60315 1214 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 EZRP15311 586 aaKnown RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 NONOQ15233 471 aaKnown RBP eCLIP11.56□□□□□ -0.56
MSI2-209ENST00000579483 HOOK3Q86VS8 718 aa11.56□□□□□ -0.56
MSI2-209ENST00000579483 LLPHQ9BRT6 129 aaKnown RBP11.56□□□□□ -0.56
MSI2-209ENST00000579483 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 ABCB5Q2M3G0 1257 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 FAM43AQ8N2R8 423 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 SCNN1DP51172 638 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 SNX16P57768 344 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 APOBRQ0VD83 1088 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 SSH3Q8TE77 659 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.55□□□□□ -0.56
MSI2-209ENST00000579483 PPARAQ07869 468 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 ANKRD35Q8N283 1001 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 NECAB1Q8N987 351 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 GREM2Q9H772 168 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 INO80Q9ULG1 1556 aaPredicted RBP11.55□□□□□ -0.56
MSI2-209ENST00000579483 ARHGEF35A5YM69 484 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 NR1I2O75469 434 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 LETM2Q2VYF4 491 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 ALS2CR12Q96Q35 445 aa11.55□□□□□ -0.56
MSI2-209ENST00000579483 SPTLC2O15270 562 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 UBE3CQ15386 1083 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 BARGINQ6ZT62 677 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 SV2BQ7L1I2 683 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 OTUD6AQ7L8S5 288 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 CCDC97Q96F63 343 aaPredicted RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 KDM2BQ8NHM5 1336 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 ZBTB7AO95365 584 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 PRPHP41219 470 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 ADD3Q9UEY8 706 aaKnown RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 NEMFO60524 1076 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 CFBP00751 764 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 DPP9Q86TI2 863 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 CSRNP1Q96S65 589 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 ZKSCAN3Q9BRR0 538 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 MLXIPQ9HAP2 919 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 UNC13BO14795 1591 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 USP17L21D6R901 530 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 MCM7P33993 719 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 TCEANC2Q96MN5 208 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 TBC1D32Q96NH3 1257 aa11.54□□□□□ -0.56
MSI2-209ENST00000579483 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
MSI2-209ENST00000579483 PRDM1O75626 825 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 CNGA1P29973 690 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 BCAMP50895 628 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms