RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MBD4O95243 580 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 PSMA5P28066 241 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 CACNB3P54284 484 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 PPP4CP60510 307 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 PTH1RQ03431 593 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 BECN1Q14457 450 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 APOBEC3FQ8IUX4 373 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 DCPSQ96C86 337 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
CSNK1D-209ENST00000578904 ZMYM6O95789 1325 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 RHBDL3P58872 404 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 NECTIN1Q15223 517 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 ALX1Q15699 326 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 GIMAP6Q6P9H5 292 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
CSNK1D-209ENST00000578904 TCP10L2B9ZVM9 353 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 PICALMQ13492 652 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 AMOTL1Q8IY63 956 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 NAPBQ9H115 298 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
CSNK1D-209ENST00000578904 ST18O60284 1047 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 TOMM70O94826 608 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 TDO2P48775 406 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 TNNI2P48788 182 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 NFIAQ12857 509 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 KCNB2Q92953 911 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 IL17RAQ96F46 866 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 SCAF8Q9UPN6 1271 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-209ENST00000578904 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 ZNF213O14771 459 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 SLC27A2O14975 620 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 WDHD1O75717 1129 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 HMGB1P09429 215 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 USP5P45974 858 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 FKBP1CQ5VVH2 108 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 TM6SF1Q9BZW5 370 aa16.54■□□□□ 0.24
CSNK1D-209ENST00000578904 FLT1P17948 1338 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 FGAP02671 866 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 TCP10Q12799 353 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 COL13A1Q5TAT6 717 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 MAPKAPK5Q8IW41 473 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 TGFBRAP1Q8WUH2 860 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 GLIS2Q9BZE0 524 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 DDX4Q9NQI0 724 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 PPP2R3BQ9Y5P8 575 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-209ENST00000578904 CNTNAP1P78357 1384 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 FOCADQ5VW36 1801 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 ENTPD3O75355 529 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 CAPN15O75808 1086 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 MCM2P49736 904 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 TRDNQ13061 729 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 RASA3Q14644 834 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 USP48Q86UV5 1035 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 FAM83AQ86UY5 434 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 HSCBQ8IWL3 235 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.24
CSNK1D-209ENST00000578904 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
CSNK1D-209ENST00000578904 GSG1L2A8MUP6 293 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 PRKAB2O43741 272 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 TMEM39BQ9GZU3 492 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 MYH1P12882 1939 aa16.51■□□□□ 0.23
CSNK1D-209ENST00000578904 POLR2AP24928 1970 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 SNX21Q969T3 373 aa16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms