RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PRRT2Q7Z6L0 340 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 SCYL3Q8IZE3 742 aa12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 PXYLP1Q8TE99 480 aa12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 DIS3LQ8TF46 1054 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 LPIN2Q92539 896 aa12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 EYA2O00167 538 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 SLC5A1P13866 664 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 RGS3P49796 1198 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 IRF5Q13568 498 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 CCDC84Q86UT8 332 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 PAK6Q9NQU5 681 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 PICK1Q9NRD5 415 aa12.67□□□□□ -0.38
NPLOC4-220ENST00000576940 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 MRPL50Q8N5N7 158 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
NPLOC4-220ENST00000576940 TRIM75PA6NK02 468 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 MAP3K10Q02779 954 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 Q7L0L9 218 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 GDF15Q99988 308 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 IDI2Q9BXS1 227 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.38
NPLOC4-220ENST00000576940 ENTPD3O75355 529 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 SYN1P17600 705 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 TRIM32Q13049 653 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 TREML2Q5T2D2 321 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 C7orf61Q8IZ16 206 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 COA7Q96BR5 231 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 SIL1Q9H173 461 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 SLC45A1Q9Y2W3 748 aa12.64□□□□□ -0.39
NPLOC4-220ENST00000576940 CTNND1O60716 968 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 BMP8BP34820 402 aa12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 PHKA1P46020 1223 aa12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 PICALMQ13492 652 aa12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 DDX4Q9NQI0 724 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 GNL3LQ9NVN8 582 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-220ENST00000576940 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 CAPN2P17655 700 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 ADORA1P30542 326 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 CEP126Q9P2H0 1117 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 DENND2AQ9ULE3 1009 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
NPLOC4-220ENST00000576940 MYH13Q9UKX3 1938 aa12.61□□□□□ -0.39
NPLOC4-220ENST00000576940 FAM196BA6NMK8 535 aa12.61□□□□□ -0.39
NPLOC4-220ENST00000576940 SPP2Q13103 211 aa12.61□□□□□ -0.39
NPLOC4-220ENST00000576940 ABCF2Q9UG63 623 aa12.61□□□□□ -0.39
NPLOC4-220ENST00000576940 GAKO14976 1311 aa12.61□□□□□ -0.39
NPLOC4-220ENST00000576940 BTDP43251 543 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 MAGEA10P43363 369 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 TIMM10P62072 90 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 ANKLE1Q8NAG6 615 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 C11orf49Q9H6J7 331 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 PTPRCP08575 1304 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 RPTORQ8N122 1335 aa12.6□□□□□ -0.39
NPLOC4-220ENST00000576940 MYH2Q9UKX2 1941 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 SEMA3EO15041 775 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 PEX10O60683 326 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 HMGCRP04035 888 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 CYP2B6P20813 491 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 HMGCS2P54868 508 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 GPR153Q6NV75 609 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 DZIP1Q86YF9 867 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 MTMR10Q9NXD2 777 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 PNMA3Q9UL41 463 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 PHIPQ8WWQ0 1821 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 UNC80Q8N2C7 3258 aa12.59□□□□□ -0.39
NPLOC4-220ENST00000576940 PTPRFP10586 1907 aa12.58□□□□□ -0.39
NPLOC4-220ENST00000576940 RFX7Q2KHR2 1363 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms