RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
RPAIN-217ENST00000575711 RPAP1Q9BWH6 1393 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-217ENST00000575711 A0A0D9SFI3 127 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 GNAT2P19087 354 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 NF2P35240 595 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 SUPT20HL1Q3ZLR7 823 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 MCMDC2Q4G0Z9 681 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
RPAIN-217ENST00000575711 ZSCAN29Q8IWY8 852 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-217ENST00000575711 STRBPQ96SI9 672 aaKnown RBP16.79■□□□□ 0.28
RPAIN-217ENST00000575711 OSBPL5Q9H0X9 879 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-217ENST00000575711 ZNF408Q9H9D4 720 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 SLC4A4Q9Y6R1 1079 aa16.79■□□□□ 0.28
RPAIN-217ENST00000575711 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
RPAIN-217ENST00000575711 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPAIN-217ENST00000575711 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 TEPSINQ96N21 525 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 ATP8A2Q9NTI2 1148 aa16.78■□□□□ 0.28
RPAIN-217ENST00000575711 AK9Q5TCS8 1911 aa16.77■□□□□ 0.28
RPAIN-217ENST00000575711 PRKAB2O43741 272 aa16.77■□□□□ 0.28
RPAIN-217ENST00000575711 CHMLP26374 656 aa16.77■□□□□ 0.28
RPAIN-217ENST00000575711 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
RPAIN-217ENST00000575711 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-217ENST00000575711 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.28
RPAIN-217ENST00000575711 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
RPAIN-217ENST00000575711 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
RPAIN-217ENST00000575711 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
RPAIN-217ENST00000575711 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
RPAIN-217ENST00000575711 CSRNP1Q96S65 589 aa16.76■□□□□ 0.27
RPAIN-217ENST00000575711 DCP1AQ9NPI6 582 aaPredicted RBP16.76■□□□□ 0.27
RPAIN-217ENST00000575711 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
RPAIN-217ENST00000575711 POLR2AP24928 1970 aaKnown RBP16.76■□□□□ 0.27
RPAIN-217ENST00000575711 ATRNL1Q5VV63 1379 aa16.76■□□□□ 0.27
RPAIN-217ENST00000575711 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 RAD50Q92878 1312 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 DDTLA6NHG4 134 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-217ENST00000575711 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
RPAIN-217ENST00000575711 APPP05067 770 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 SH3BP5LQ7L8J4 393 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-217ENST00000575711 NACAP1Q9BZK3 213 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
RPAIN-217ENST00000575711 TMEM88BA6NKF7 163 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 PPP1R12BO60237 982 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-217ENST00000575711 CDC45O75419 566 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-217ENST00000575711 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 APLP1P51693 650 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-217ENST00000575711 CST9Q5W186 159 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 DCAF15Q66K64 600 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 GIMAP6Q6P9H5 292 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 AMOTL1Q8IY63 956 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 C2orf69Q8N8R5 385 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-217ENST00000575711 PI4KBQ9UBF8 816 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
RPAIN-217ENST00000575711 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
RPAIN-217ENST00000575711 GSG1L2A8MUP6 293 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 TDO2P48775 406 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 FKBP1BP68106 108 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 PRKG1Q13976 671 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 FOCADQ5VW36 1801 aa16.73■□□□□ 0.27
RPAIN-217ENST00000575711 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
RPAIN-217ENST00000575711 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
RPAIN-217ENST00000575711 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
RPAIN-217ENST00000575711 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
RPAIN-217ENST00000575711 NAPBQ9H115 298 aa16.72■□□□□ 0.27
RPAIN-217ENST00000575711 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-217ENST00000575711 ARPP21Q9UBL0 812 aaPredicted RBP16.72■□□□□ 0.27
RPAIN-217ENST00000575711 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 USP17L21D6R901 530 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
RPAIN-217ENST00000575711 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-217ENST00000575711 CRACR2BQ8N4Y2 399 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-217ENST00000575711 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
RPAIN-217ENST00000575711 ANGEL1Q9UNK9 670 aaKnown RBP16.71■□□□□ 0.27
RPAIN-217ENST00000575711 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 CDK5RAP2Q96SN8 1893 aa16.71■□□□□ 0.27
RPAIN-217ENST00000575711 PAPPA2Q9BXP8 1791 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 SGSM2O43147 1006 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 TBC1D12O60347 775 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 IREB2P48200 963 aaKnown RBP16.7■□□□□ 0.26
RPAIN-217ENST00000575711 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 EHD4Q9H223 541 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 IL25Q9H293 177 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPAIN-217ENST00000575711 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms