RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 LCORLQ8N3X6 602 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
NDE1-209ENST00000574109 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
NDE1-209ENST00000574109 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
NDE1-209ENST00000574109 TCP10L2B9ZVM9 353 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 CHMLP26374 656 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
NDE1-209ENST00000574109 RASA3Q14644 834 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 SUPT20HL1Q3ZLR7 823 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 MAP1SQ66K74 1059 aaPredicted RBP16.25■□□□□ 0.19
NDE1-209ENST00000574109 CWC27Q6UX04 472 aaKnown RBP16.25■□□□□ 0.19
NDE1-209ENST00000574109 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 STRBPQ96SI9 672 aaKnown RBP16.25■□□□□ 0.19
NDE1-209ENST00000574109 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
NDE1-209ENST00000574109 M0R2C6 588 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 HLA-DOAP06340 250 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 NFIAQ12857 509 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 TGFBRAP1Q8WUH2 860 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 FAM227BQ96M60 508 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
NDE1-209ENST00000574109 FAM198AQ9UFP1 575 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 SLC4A4Q9Y6R1 1079 aa16.24■□□□□ 0.19
NDE1-209ENST00000574109 CACNB3P54284 484 aa16.23■□□□□ 0.19
NDE1-209ENST00000574109 PICALMQ13492 652 aa16.23■□□□□ 0.19
NDE1-209ENST00000574109 DCAF15Q66K64 600 aa16.23■□□□□ 0.19
NDE1-209ENST00000574109 GLIS2Q9BZE0 524 aaPredicted RBP16.23■□□□□ 0.19
NDE1-209ENST00000574109 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
NDE1-209ENST00000574109 ADM5C9JUS6 153 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 FKBP1BP68106 108 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
NDE1-209ENST00000574109 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 CSRNP1Q96S65 589 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
NDE1-209ENST00000574109 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
NDE1-209ENST00000574109 SSC5DA1L4H1 1573 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
NDE1-209ENST00000574109 SGSM2O43147 1006 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 CHGBP05060 677 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 TDO2P48775 406 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 TCP10Q12799 353 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 USP48Q86UV5 1035 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 SEC62Q99442 399 aaKnown RBP16.21■□□□□ 0.19
NDE1-209ENST00000574109 DSCC1Q9BVC3 393 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 TMEM39BQ9GZU3 492 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 NAPBQ9H115 298 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 EHD4Q9H223 541 aa16.21■□□□□ 0.19
NDE1-209ENST00000574109 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
NDE1-209ENST00000574109 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
NDE1-209ENST00000574109 ITGBL1O95965 494 aaPredicted RBP16.2■□□□□ 0.18
NDE1-209ENST00000574109 APPP05067 770 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 ALX1Q15699 326 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 ZNF589Q86UQ0 364 aaPredicted RBP16.2■□□□□ 0.18
NDE1-209ENST00000574109 TEPSINQ96N21 525 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 ESYT1Q9BSJ8 1104 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 MCM9Q9NXL9 1143 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 PI4KBQ9UBF8 816 aa16.2■□□□□ 0.18
NDE1-209ENST00000574109 UNCXA6NJT0 531 aa16.19■□□□□ 0.18
NDE1-209ENST00000574109 GSG1L2A8MUP6 293 aa16.19■□□□□ 0.18
NDE1-209ENST00000574109 PPP1R12BO60237 982 aaPredicted RBP16.19■□□□□ 0.18
NDE1-209ENST00000574109 SBK1Q52WX2 424 aa16.19■□□□□ 0.18
NDE1-209ENST00000574109 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
NDE1-209ENST00000574109 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
NDE1-209ENST00000574109 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
NDE1-209ENST00000574109 TBC1D12O60347 775 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 REC8O95072 547 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
NDE1-209ENST00000574109 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
NDE1-209ENST00000574109 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
NDE1-209ENST00000574109 NT5C2P49902 561 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 CCDC129Q6ZRS4 1044 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
NDE1-209ENST00000574109 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
NDE1-209ENST00000574109 PRKAB2O43741 272 aa16.17■□□□□ 0.18
NDE1-209ENST00000574109 IREB2P48200 963 aaKnown RBP16.17■□□□□ 0.18
NDE1-209ENST00000574109 ARMC9Q7Z3E5 817 aa16.17■□□□□ 0.18
NDE1-209ENST00000574109 METTL16Q86W50 562 aaKnown RBP16.17■□□□□ 0.18
NDE1-209ENST00000574109 IFNL3Q8IZI9 196 aa16.17■□□□□ 0.18
NDE1-209ENST00000574109 CRACR2BQ8N4Y2 399 aaPredicted RBP16.17■□□□□ 0.18
NDE1-209ENST00000574109 ZNF341Q9BYN7 854 aa16.17■□□□□ 0.18
NDE1-209ENST00000574109 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
NDE1-209ENST00000574109 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 TRAF5O00463 557 aa16.16■□□□□ 0.18
NDE1-209ENST00000574109 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 PCP11498 1178 aaKnown RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 MAP3K10Q02779 954 aa16.16■□□□□ 0.18
NDE1-209ENST00000574109 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
NDE1-209ENST00000574109 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
NDE1-209ENST00000574109 FOXP4Q8IVH2 680 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms