RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
ERCC4-204ENST00000573018 IKZF1Q13422 519 aa6.63□□□□□ -1.35
ERCC4-204ENST00000573018 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
ERCC4-204ENST00000573018 PHLDB3Q6NSJ2 640 aa6.63□□□□□ -1.35
ERCC4-204ENST00000573018 LIN37Q96GY3 246 aaPredicted RBP6.63□□□□□ -1.35
ERCC4-204ENST00000573018 BRPF3Q9ULD4 1205 aa6.63□□□□□ -1.35
ERCC4-204ENST00000573018 CPNE3O75131 537 aaKnown RBP6.62□□□□□ -1.35
ERCC4-204ENST00000573018 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
ERCC4-204ENST00000573018 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
ERCC4-204ENST00000573018 CCER1Q8TC90 406 aaPredicted RBP6.62□□□□□ -1.35
ERCC4-204ENST00000573018 KCNB2Q92953 911 aa6.62□□□□□ -1.35
ERCC4-204ENST00000573018 ISL2Q96A47 359 aa6.62□□□□□ -1.35
ERCC4-204ENST00000573018 TOX2Q96NM4 488 aa6.62□□□□□ -1.35
ERCC4-204ENST00000573018 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
ERCC4-204ENST00000573018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.61□□□□□ -1.35
ERCC4-204ENST00000573018 GADD45BO75293 160 aaPredicted RBP6.61□□□□□ -1.35
ERCC4-204ENST00000573018 ZP2Q05996 745 aa6.61□□□□□ -1.35
ERCC4-204ENST00000573018 FYB2Q5VWT5 728 aa6.61□□□□□ -1.35
ERCC4-204ENST00000573018 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
ERCC4-204ENST00000573018 BHLHE22Q8NFJ8 381 aaPredicted RBP6.61□□□□□ -1.35
ERCC4-204ENST00000573018 HEXIM2Q96MH2 286 aaKnown RBP6.61□□□□□ -1.35
ERCC4-204ENST00000573018 TNKS2Q9H2K2 1166 aa6.61□□□□□ -1.35
ERCC4-204ENST00000573018 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
ERCC4-204ENST00000573018 ARID3CA6NKF2 412 aa6.6□□□□□ -1.35
ERCC4-204ENST00000573018 NEFLP07196 543 aa6.6□□□□□ -1.35
ERCC4-204ENST00000573018 RPS26P11Q5JNZ5 115 aaPredicted RBP6.6□□□□□ -1.35
ERCC4-204ENST00000573018 PRPF40BQ6NWY9 871 aaKnown RBP6.6□□□□□ -1.35
ERCC4-204ENST00000573018 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
ERCC4-204ENST00000573018 C1QL4Q86Z23 238 aa6.6□□□□□ -1.35
ERCC4-204ENST00000573018 LRRC56Q8IYG6 542 aaPredicted RBP6.6□□□□□ -1.35
ERCC4-204ENST00000573018 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
ERCC4-204ENST00000573018 GPN3Q9UHW5 284 aaPredicted RBP6.6□□□□□ -1.35
ERCC4-204ENST00000573018 H3BRB1 525 aa6.59□□□□□ -1.35
ERCC4-204ENST00000573018 SYDE1Q6ZW31 735 aaPredicted RBP6.59□□□□□ -1.35
ERCC4-204ENST00000573018 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
ERCC4-204ENST00000573018 CCDC74AQ96AQ1 378 aa6.59□□□□□ -1.35
ERCC4-204ENST00000573018 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
ERCC4-204ENST00000573018 CTNND2Q9UQB3 1225 aa6.59□□□□□ -1.35
ERCC4-204ENST00000573018 SNX11Q9Y5W9 270 aa6.59□□□□□ -1.35
ERCC4-204ENST00000573018 TSPAN15O95858 294 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
ERCC4-204ENST00000573018 GRM2Q14416 872 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 MPZL3Q6UWV2 235 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 PRR23BQ6ZRT6 265 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 ZSCAN18Q8TBC5 510 aaPredicted RBP6.58□□□□□ -1.36
ERCC4-204ENST00000573018 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
ERCC4-204ENST00000573018 ICMTO60725 284 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 DTHD1Q6ZMT9 781 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 FAM214BQ7L5A3 538 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 PDZD3Q86UT5 571 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 ANKLE2Q86XL3 938 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 PPP1R16BQ96T49 567 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 LMCD1Q9NZU5 365 aa6.57□□□□□ -1.36
ERCC4-204ENST00000573018 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
ERCC4-204ENST00000573018 NDUFB5O43674 189 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 ZSCAN22P10073 491 aaPredicted RBP6.56□□□□□ -1.36
ERCC4-204ENST00000573018 AFMP43652 599 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 FCGRTP55899 365 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 ECM1Q16610 540 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 NKPD1Q17RQ9 610 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 ZC3H12AQ5D1E8 599 aaKnown RBP6.56□□□□□ -1.36
ERCC4-204ENST00000573018 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
ERCC4-204ENST00000573018 GLYCTKQ8IVS8 523 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
ERCC4-204ENST00000573018 GTF2IRD1Q9UHL9 959 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 TRAK1Q9UPV9 953 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 CSADQ9Y600 493 aa6.56□□□□□ -1.36
ERCC4-204ENST00000573018 GLI1P08151 1106 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 C1QTNF9P0C862 333 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 SERPINB4P48594 390 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 PPP2R3AQ06190 1150 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 UBE3DQ7Z6J8 389 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 KIRREL1Q96J84 757 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 FAM129BQ96TA1 746 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 NIF3L1Q9GZT8 377 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 PRDM10Q9NQV6 1147 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 TMEM39AQ9NV64 488 aa6.55□□□□□ -1.36
ERCC4-204ENST00000573018 ERVK-24P63145 666 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 PDE3BQ13370 1112 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 PPM1JQ5JR12 505 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 TMC1Q8TDI8 760 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 GPBAR1Q8TDU6 330 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 CARS2Q9HA77 564 aaKnown RBP6.54□□□□□ -1.36
ERCC4-204ENST00000573018 EGFL7Q9UHF1 273 aa6.54□□□□□ -1.36
ERCC4-204ENST00000573018 NCANO14594 1321 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 PITPNM2Q9BZ72 1349 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 GNAT3A8MTJ3 354 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 IGF2BP3O00425 579 aaKnown RBP eCLIP6.53□□□□□ -1.36
ERCC4-204ENST00000573018 PRRG2O14669 202 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 GPR182O15218 404 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 TMEM67Q5HYA8 995 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 MPRIPQ6WCQ1 1025 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
ERCC4-204ENST00000573018 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms