RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 KIF2CQ99661 725 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 LAMA4Q16363 1823 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 USP17L12C9JPN9 530 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 USP17L21D6R901 530 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 MYO1BO43795 1136 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 PPARAQ07869 468 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 NFIAQ12857 509 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 SPDYE2Q495Y8 402 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 CTR9Q6PD62 1173 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 SAMD7Q7Z3H4 446 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 IL17RAQ96F46 866 aa18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 ZNF70Q9UC06 446 aaPredicted RBP18.32■□□□□ 0.52
HERPUD1-219ENST00000570273 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 WNT10BO00744 389 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 CYP2D6P10635 497 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 CTDSPL2Q05D32 466 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 RABEP1Q15276 862 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 SLC4A8Q2Y0W8 1093 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 TSGA10IPQ3SY00 556 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 VEZTQ9HBM0 779 aa18.31■□□□□ 0.52
HERPUD1-219ENST00000570273 LAMB1P07942 1786 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 E7EWF7 191 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 EGFRP00533 1210 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 PSMA5P28066 241 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 EPS15P42566 896 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 ADCK5Q3MIX3 580 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 STOX1Q6ZVD7 989 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 CDK5RAP2Q96SN8 1893 aa18.3■□□□□ 0.52
HERPUD1-219ENST00000570273 FOCADQ5VW36 1801 aa18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 CASTP20810 708 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 FAM198AQ9UFP1 575 aa18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 BAZ2AQ9UIF9 1905 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-219ENST00000570273 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 TCP10L2B9ZVM9 353 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 TCP10Q12799 353 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 STK11IPQ8N1F8 1099 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 UPF3BQ9BZI7 483 aaKnown RBP18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 TM6SF1Q9BZW5 370 aa18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
HERPUD1-219ENST00000570273 ENTPD3O75355 529 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 EVX2Q03828 476 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 TRDNQ13061 729 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 AKNAD1Q5T1N1 836 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 RALYLQ86SE5 291 aaKnown RBP18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 NEDD4P46934 1319 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 ROBO3Q96MS0 1386 aa18.27■□□□□ 0.52
HERPUD1-219ENST00000570273 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 HLA-DOAP06340 250 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 FKBP1CQ5VVH2 108 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 MFSD6Q6ZSS7 791 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 ZSCAN29Q8IWY8 852 aaPredicted RBP18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 HACL1Q9UJ83 578 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 CYP46A1Q9Y6A2 500 aa18.26■□□□□ 0.51
HERPUD1-219ENST00000570273 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 CPA1P15085 419 aa18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 NEK4P51957 841 aa18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 CNNM2Q9H8M5 875 aa18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 ZSWIM6Q9HCJ5 1215 aa18.25■□□□□ 0.51
HERPUD1-219ENST00000570273 CNTNAP1P78357 1384 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 TNNI2P48788 182 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 PLCD1P51178 756 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 TNFAIP1Q13829 316 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 DYNLL2Q96FJ2 89 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 TACC3Q9Y6A5 838 aa18.24■□□□□ 0.51
HERPUD1-219ENST00000570273 MYH1P12882 1939 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 254.4 ms