RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 LRCH3Q96II8 777 aa13.44□□□□□ -0.26
LPCAT4-208ENST00000569804 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
LPCAT4-208ENST00000569804 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 SALL1Q9NSC2 1324 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 ADCY3O60266 1144 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 IFIT1P09914 478 aaKnown RBP13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 PTPRAP18433 802 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 MAP3K10Q02779 954 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 PXYLP1Q8TE99 480 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 SLC45A1Q9Y2W3 748 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 NR2E3Q9Y5X4 410 aa13.43□□□□□ -0.26
LPCAT4-208ENST00000569804 GAKO14976 1311 aa13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 EYA2O00167 538 aa13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 ZBTB22O15209 634 aa13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 LPIN2Q92539 896 aa13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 IDI2Q9BXS1 227 aa13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 BIN2Q9UBW5 565 aaPredicted RBP13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 LAMA2P24043 3122 aaKnown RBP13.42□□□□□ -0.26
LPCAT4-208ENST00000569804 DLL1O00548 723 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 SLC5A1P13866 664 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 GDF15Q99988 308 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 ZHX2Q9Y6X8 837 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
LPCAT4-208ENST00000569804 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 EVI5O60447 810 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 ENTPD3O75355 529 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 RGS3P49796 1198 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
LPCAT4-208ENST00000569804 TNPO2O14787 897 aaKnown RBP13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 PHKA1P46020 1223 aa13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 GADL1Q6ZQY3 521 aa13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 PAWRQ96IZ0 340 aaKnown RBP13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 PTPRCP08575 1304 aa13.39□□□□□ -0.27
LPCAT4-208ENST00000569804 CAPN2P17655 700 aa13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 BMP8BP34820 402 aa13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 ATP2B3Q16720 1220 aa13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.38□□□□□ -0.27
LPCAT4-208ENST00000569804 EYSQ5T1H1 3165 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 TRIM75PA6NK02 468 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 SEMA3EO15041 775 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 CIAO1O76071 339 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 ZNF384Q8TF68 577 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 PICK1Q9NRD5 415 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 VCANP13611 3396 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
LPCAT4-208ENST00000569804 COL2A1P02458 1487 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 ADORA1P30542 326 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 RHBDL3P58872 404 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 TRIM32Q13049 653 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 RASGRF1Q13972 1273 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 GPR153Q6NV75 609 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 GJD2Q9UKL4 321 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 CDK5RAP2Q96SN8 1893 aa13.36□□□□□ -0.27
LPCAT4-208ENST00000569804 CCDC102BQ68D86 513 aa13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 SIL1Q9H173 461 aa13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 DENND2AQ9ULE3 1009 aa13.35□□□□□ -0.27
LPCAT4-208ENST00000569804 FOCADQ5VW36 1801 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 TBC1D12O60347 775 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 HMGCRP04035 888 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 BTDP43251 543 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 LRIT3Q3SXY7 679 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 Q7L0L9 218 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
LPCAT4-208ENST00000569804 TRIB2Q92519 343 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms