RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
TCF4-239ENST00000568186 MKNK2Q9HBH9 465 aa5.49□□□□□ -1.53
TCF4-239ENST00000568186 NPHS2Q9NP85 383 aa5.49□□□□□ -1.53
TCF4-239ENST00000568186 DISC1Q9NRI5 854 aa5.49□□□□□ -1.53
TCF4-239ENST00000568186 OXCT1P55809 520 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 PTPN12Q05209 780 aaKnown RBP5.48□□□□□ -1.53
TCF4-239ENST00000568186 TTLL4Q14679 1199 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 KIF4BQ2VIQ3 1234 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 ANGEL2Q5VTE6 544 aaKnown RBP5.48□□□□□ -1.53
TCF4-239ENST00000568186 CILP2Q8IUL8 1156 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 FLAD1Q8NFF5 587 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 SLC38A3Q99624 504 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 DUSP23Q9BVJ7 150 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 ZC3H12CQ9C0D7 883 aaKnown RBP5.48□□□□□ -1.53
TCF4-239ENST00000568186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
TCF4-239ENST00000568186 PLAGL2Q9UPG8 496 aa5.48□□□□□ -1.53
TCF4-239ENST00000568186 SOWAHDA6NJG2 315 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 HCLS1P14317 486 aaPredicted RBP5.47□□□□□ -1.53
TCF4-239ENST00000568186 FAAP100Q0VG06 881 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 ORC1Q13415 861 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 PRPF40BQ6NWY9 871 aaKnown RBP5.47□□□□□ -1.53
TCF4-239ENST00000568186 ARHGAP27Q6ZUM4 889 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 FAM84AQ96KN4 292 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 FAM129BQ96TA1 746 aa5.47□□□□□ -1.53
TCF4-239ENST00000568186 TMEM265A0A087WTH1 108 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 LRRC10BA6NIK2 292 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 NEFMP07197 916 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 GSTP1P09211 210 aaKnown RBP5.46□□□□□ -1.54
TCF4-239ENST00000568186 SLFN14P0C7P3 912 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 ITIH2P19823 946 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 ZNF157P51786 506 aaPredicted RBP5.46□□□□□ -1.54
TCF4-239ENST00000568186 RPS26P11Q5JNZ5 115 aaPredicted RBP5.46□□□□□ -1.54
TCF4-239ENST00000568186 SLC23A3Q6PIS1 610 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 ZSWIM9Q86XI8 627 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 DMRTB1Q96MA1 342 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 TRAIPQ9BWF2 469 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 PRDM7Q9NQW5 492 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 KRT82Q9NSB4 513 aa5.46□□□□□ -1.54
TCF4-239ENST00000568186 ZNF503-AS2A6NEH8 195 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 RNGTTO60942 597 aaKnown RBP5.45□□□□□ -1.54
TCF4-239ENST00000568186 CPNE3O75131 537 aaKnown RBP5.45□□□□□ -1.54
TCF4-239ENST00000568186 ECM1Q16610 540 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 TOP6BLQ8N6T0 577 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 BHLHE22Q8NFJ8 381 aaPredicted RBP5.45□□□□□ -1.54
TCF4-239ENST00000568186 RBCK1Q9BYM8 510 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 TNKS2Q9H2K2 1166 aa5.45□□□□□ -1.54
TCF4-239ENST00000568186 BIN2Q9UBW5 565 aaPredicted RBP5.45□□□□□ -1.54
TCF4-239ENST00000568186 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 MLANAQ16655 118 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 PDZD3Q86UT5 571 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 TMC1Q8TDI8 760 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 ISL2Q96A47 359 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 ALKBH8Q96BT7 664 aaKnown RBP5.44□□□□□ -1.54
TCF4-239ENST00000568186 DNAJC25Q9H1X3 360 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 DCTN4Q9UJW0 460 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 PCOLCE2Q9UKZ9 415 aa5.44□□□□□ -1.54
TCF4-239ENST00000568186 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.43□□□□□ -1.54
TCF4-239ENST00000568186 PDIA4P13667 645 aaKnown RBP5.43□□□□□ -1.54
TCF4-239ENST00000568186 KCNMB1Q16558 191 aa5.43□□□□□ -1.54
TCF4-239ENST00000568186 CCDC74AQ96AQ1 378 aa5.43□□□□□ -1.54
TCF4-239ENST00000568186 HEXIM2Q96MH2 286 aaKnown RBP5.43□□□□□ -1.54
TCF4-239ENST00000568186 IVNS1ABPQ9Y6Y0 642 aa5.43□□□□□ -1.54
TCF4-239ENST00000568186 ZBTB7CA1YPR0 619 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 GPR182O15218 404 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 GADD45BO75293 160 aaPredicted RBP5.42□□□□□ -1.54
TCF4-239ENST00000568186 TSPAN15O95858 294 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 HNRNPUQ00839 825 aaKnown RBP eCLIP5.42□□□□□ -1.54
TCF4-239ENST00000568186 ZP2Q05996 745 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 IKZF1Q13422 519 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 GRM2Q14416 872 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 C1QL4Q86Z23 238 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 SPACA3Q8IXA5 215 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 LIN37Q96GY3 246 aaPredicted RBP5.42□□□□□ -1.54
TCF4-239ENST00000568186 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 CTNND2Q9UQB3 1225 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 SNX11Q9Y5W9 270 aa5.42□□□□□ -1.54
TCF4-239ENST00000568186 EIF1AYO14602 144 aaKnown RBP5.41□□□□□ -1.54
TCF4-239ENST00000568186 ZNF865P0CJ78 1059 aaPredicted RBP5.41□□□□□ -1.54
TCF4-239ENST00000568186 CFPP27918 469 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 RAP1GAPP47736 663 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 FAM214BQ7L5A3 538 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
TCF4-239ENST00000568186 ASB11Q8WXH4 323 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 KCNB2Q92953 911 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 TOX2Q96NM4 488 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 SSU72Q9NP77 194 aaKnown RBP5.41□□□□□ -1.54
TCF4-239ENST00000568186 GPN3Q9UHW5 284 aaPredicted RBP5.41□□□□□ -1.54
TCF4-239ENST00000568186 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
TCF4-239ENST00000568186 MAPK1P28482 360 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 ERVK-24P63145 666 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 ZC3H12AQ5D1E8 599 aaKnown RBP5.4□□□□□ -1.54
TCF4-239ENST00000568186 FYB2Q5VWT5 728 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 LCNL1Q6ZST4 164 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 RNF214Q8ND24 703 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 STK35Q8TDR2 534 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 TMEM39AQ9NV64 488 aa5.4□□□□□ -1.54
TCF4-239ENST00000568186 CCDC9Q9Y3X0 531 aaKnown RBP5.4□□□□□ -1.54
TCF4-239ENST00000568186 IGHA2P01877 340 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms