RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 GAKO14976 1311 aa12.4□□□□□ -0.42
TCF4-236ENST00000567880 RBM5P52756 815 aaKnown RBP eCLIP12.39□□□□□ -0.43
TCF4-236ENST00000567880 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 TM6SF1Q9BZW5 370 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 ZMYM6O95789 1325 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 CRKP46108 304 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 PPP4CP60510 307 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 SLC4A8Q2Y0W8 1093 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 DCP1AQ9NPI6 582 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
TCF4-236ENST00000567880 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
TCF4-236ENST00000567880 PLCG2P16885 1265 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 PRELPP51888 382 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
TCF4-236ENST00000567880 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 TIAM2Q8IVF5 1701 aa12.38□□□□□ -0.43
TCF4-236ENST00000567880 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 USP17L21D6R901 530 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
TCF4-236ENST00000567880 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 AK2P54819 239 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 CXCL9Q07325 125 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 PPARAQ07869 468 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 TTC14Q96N46 770 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
TCF4-236ENST00000567880 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 MYH8P13535 1937 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 SMIM22K7EJ46 135 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 RHBDL3P58872 404 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 TRDNQ13061 729 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 CIAPIN1Q6FI81 312 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
TCF4-236ENST00000567880 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 CCDC82Q8N4S0 544 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
TCF4-236ENST00000567880 DDX60LQ5H9U9 1706 aaKnown RBP12.36□□□□□ -0.43
TCF4-236ENST00000567880 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
TCF4-236ENST00000567880 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-236ENST00000567880 PICALMQ13492 652 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 RNF25Q96BH1 459 aaPredicted RBP12.36□□□□□ -0.43
TCF4-236ENST00000567880 ZDHHC15Q96MV8 337 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 USP40Q9NVE5 1235 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 SAP30BPQ9UHR5 308 aaKnown RBP12.36□□□□□ -0.43
TCF4-236ENST00000567880 NEDD4P46934 1319 aa12.36□□□□□ -0.43
TCF4-236ENST00000567880 CYP2D6P10635 497 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 FGD1P98174 961 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 EVX2Q03828 476 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 OGFOD1Q8N543 542 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 B4E1Z4 1266 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 MCM2P49736 904 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
TCF4-236ENST00000567880 TNIP1Q15025 636 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 GJA3Q9Y6H8 435 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 FLT1P17948 1338 aa12.35□□□□□ -0.43
TCF4-236ENST00000567880 POLR3DP05423 398 aaPredicted RBP12.34□□□□□ -0.43
TCF4-236ENST00000567880 CACNB3P54284 484 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 Q6ZUG5 572 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 AMOTL1Q8IY63 956 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 AGBL3Q8NEM8 1001 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
TCF4-236ENST00000567880 GMLQ99445 158 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms